Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F24
         (895 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC098586-1|AAH98586.1|  995|Homo sapiens PHLDB1 protein protein.       32   2.4  
AK074070-1|BAB84896.1| 1326|Homo sapiens FLJ00141 protein protein.     32   2.4  
AB177859-1|BAD66837.1| 1125|Homo sapiens KIAA0638 splice variant...    32   2.4  
AB094090-1|BAC76044.1| 1377|Homo sapiens DLNB07 protein.               32   2.4  
AB014538-1|BAA31613.2| 1384|Homo sapiens KIAA0638 protein protein.     32   2.4  

>BC098586-1|AAH98586.1|  995|Homo sapiens PHLDB1 protein protein.
          Length = 995

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 242 RSPYAGRQPIGFPAIQSTAPPEDALGNRFGDDISTTTIRLP-IEALGDADLVNRLRKLP 415
           R P   R+P G   + +T+P    +G  F D ++T T++ P    LG   L + +R+LP
Sbjct: 401 RPPSPFREPPGSERVLTTSPSRQLVGRTFSDGLATRTLQPPESPRLGRRGL-DSMRELP 458


>AK074070-1|BAB84896.1| 1326|Homo sapiens FLJ00141 protein protein.
          Length = 1326

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 242 RSPYAGRQPIGFPAIQSTAPPEDALGNRFGDDISTTTIRLP-IEALGDADLVNRLRKLP 415
           R P   R+P G   + +T+P    +G  F D ++T T++ P    LG   L + +R+LP
Sbjct: 408 RPPSPFREPPGSERVLTTSPSRQLVGRTFSDGLATRTLQPPESPRLGRRGL-DSMRELP 465


>AB177859-1|BAD66837.1| 1125|Homo sapiens KIAA0638 splice variant 2
           protein.
          Length = 1125

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 242 RSPYAGRQPIGFPAIQSTAPPEDALGNRFGDDISTTTIRLP-IEALGDADLVNRLRKLP 415
           R P   R+P G   + +T+P    +G  F D ++T T++ P    LG   L + +R+LP
Sbjct: 145 RPPSPFREPPGSERVLTTSPSRQLVGRTFSDGLATRTLQPPESPRLGRRGL-DSMRELP 202


>AB094090-1|BAC76044.1| 1377|Homo sapiens DLNB07 protein.
          Length = 1377

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 242 RSPYAGRQPIGFPAIQSTAPPEDALGNRFGDDISTTTIRLP-IEALGDADLVNRLRKLP 415
           R P   R+P G   + +T+P    +G  F D ++T T++ P    LG   L + +R+LP
Sbjct: 401 RPPSPFREPPGSERVLTTSPSRQLVGRTFSDGLATRTLQPPESPRLGRRGL-DSMRELP 458


>AB014538-1|BAA31613.2| 1384|Homo sapiens KIAA0638 protein protein.
          Length = 1384

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 242 RSPYAGRQPIGFPAIQSTAPPEDALGNRFGDDISTTTIRLP-IEALGDADLVNRLRKLP 415
           R P   R+P G   + +T+P    +G  F D ++T T++ P    LG   L + +R+LP
Sbjct: 408 RPPSPFREPPGSERVLTTSPSRQLVGRTFSDGLATRTLQPPESPRLGRRGL-DSMRELP 465


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,179,883
Number of Sequences: 237096
Number of extensions: 1879248
Number of successful extensions: 3496
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3496
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)