Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F24
         (895 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-P...    77   3e-14
AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-P...    57   3e-08

>AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-PA
           protein.
          Length = 171

 Score = 77.0 bits (181), Expect = 3e-14
 Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
 Frame = +2

Query: 248 PYAG--RQPIGFPAIQSTAPPE-----DALGNRFGDDISTT--TIRLPIEALGDADLVNR 400
           PY    R P+G P +  +AP E       + N  G    T     RLPI+A GD D VNR
Sbjct: 70  PYGAPQRPPMGVPLVHPSAPEELLASYSPVNNAAGFPAQTAPDNSRLPIDARGDRDWVNR 129

Query: 401 LRKLPVDKQPFWLLNWLALEANRKNPQ----NFNQRPNSF 508
           L++LPVD+QPFWL+N+ A+EA R NP+    N+  R NSF
Sbjct: 130 LKQLPVDQQPFWLVNYQAIEAMRNNPRPNVGNYEWRGNSF 169


>AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-PA
           protein.
          Length = 190

 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 25/63 (39%), Positives = 39/63 (61%)
 Frame = +2

Query: 287 QSTAPPEDALGNRFGDDISTTTIRLPIEALGDADLVNRLRKLPVDKQPFWLLNWLALEAN 466
           Q T  P  +   R    ++    +LPI+A GD + VN L +LPV++QPFW +N+ A+EA+
Sbjct: 111 QFTTQPTSSTAGRPATSVAPVFNQLPIDAHGDREWVNHLSQLPVEQQPFWFINYQAIEAH 170

Query: 467 RKN 475
           R +
Sbjct: 171 RNS 173


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,868,113
Number of Sequences: 53049
Number of extensions: 596456
Number of successful extensions: 1232
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)