Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_F21
(911 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 28 0.12
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 27 0.20
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 27 0.20
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 27 0.20
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 27 0.20
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 23 2.5
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 2.5
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 27.9 bits (59), Expect = 0.12
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 169 PGNKQWPARPGLQHQISQNPSMNLTLNRSINLYPLTN 279
PG+ P P L H I+ NP + ++ S NL PL N
Sbjct: 328 PGHSTSPNLP-LTHNIAHNPYPSHSIYPSSNLMPLNN 363
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 560 NGSLKTQ*GTGGDRISNHRNIHTFHLTSQNQRSI 661
+G + G+G DRI + IH +Q +R I
Sbjct: 1398 DGDYENDSGSGPDRIGRRKTIHNLERAAQKKRQI 1431
Score = 23.8 bits (49), Expect = 1.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 99 TTKNCFTKPNKRQVFGHFKIL 37
+++ CF K +K+ F HF I+
Sbjct: 150 SSRMCFFKSSKKPAFSHFLIV 170
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 560 NGSLKTQ*GTGGDRISNHRNIHTFHLTSQNQRSI 661
+G + G+G DRI + IH +Q +R I
Sbjct: 1398 DGDYENDSGSGPDRIGRRKTIHNLERAAQKKRQI 1431
Score = 23.8 bits (49), Expect = 1.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 99 TTKNCFTKPNKRQVFGHFKIL 37
+++ CF K +K+ F HF I+
Sbjct: 150 SSRMCFFKSSKKPAFSHFLIV 170
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 560 NGSLKTQ*GTGGDRISNHRNIHTFHLTSQNQRSI 661
+G + G+G DRI + IH +Q +R I
Sbjct: 1398 DGDYENDSGSGPDRIGRRKTIHNLERAAQKKRQI 1431
Score = 23.8 bits (49), Expect = 1.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 99 TTKNCFTKPNKRQVFGHFKIL 37
+++ CF K +K+ F HF I+
Sbjct: 150 SSRMCFFKSSKKPAFSHFLIV 170
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 560 NGSLKTQ*GTGGDRISNHRNIHTFHLTSQNQRSI 661
+G + G+G DRI + IH +Q +R I
Sbjct: 1398 DGDYENDSGSGPDRIGRRKTIHNLERAAQKKRQI 1431
Score = 23.8 bits (49), Expect = 1.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 99 TTKNCFTKPNKRQVFGHFKIL 37
+++ CF K +K+ F HF I+
Sbjct: 150 SSRMCFFKSSKKPAFSHFLIV 170
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 548 VSNRNGSLKTQ*GTGGDRISNHRNIH 625
+SN N SL GD + H+N+H
Sbjct: 191 ISNLNTSLIHSTHLNGDIVKEHQNLH 216
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 151 AAVQGPPGNKQWPARPGL 204
AAVQ P G ++ ARPG+
Sbjct: 32 AAVQVPQGGRRRAARPGV 49
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,862
Number of Sequences: 336
Number of extensions: 4928
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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