Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F19
         (935 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1223|AAF50583.2|  724|Drosophila melanogaster CG8605-PA...    32   1.3  
AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA...    31   1.7  
AY047513-1|AAK77245.1|  724|Drosophila melanogaster GH01880p pro...    30   5.2  
AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA...    30   5.2  

>AE014296-1223|AAF50583.2|  724|Drosophila melanogaster CG8605-PA
           protein.
          Length = 724

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -2

Query: 418 KPRWVFXGKLPWGGXQFFLVGKKIXPQVVFQGKXE 314
           KP W +   L WG    F VGK   P  +  GK +
Sbjct: 285 KPEWFYTQILNWGKETHFFVGKTFQPAAIKAGKLD 319


>AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA
           protein.
          Length = 440

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 31/117 (26%), Positives = 33/117 (28%), Gaps = 8/117 (6%)
 Frame = +2

Query: 584 TLXPPXXXKKX---PPPPKKXGXFXKKKXXFFXPPPXXKKXGGXXXXXXXXXXXXXXXXG 754
           T  PP   KK    PPPP        KK  +  PP    K  G                 
Sbjct: 292 TPPPPPPTKKVVYTPPPPPPP----PKKVVYTPPPTGILKDDGYHYGQPSVKFEVSAPPA 347

Query: 755 XXXXXXPPPXXKKX-----VXFLAXKXKXXXXXXPPPPKXKXXXXXKKKXXXFXPPP 910
                 PPP  KK      V       K      PPPP         KK   + PPP
Sbjct: 348 PKVEYLPPPPTKKVYVAPPVYVPPPTKKVVVYTPPPPPPPVYIPPPTKKVVVYTPPP 404



 Score = 29.9 bits (64), Expect = 5.2
 Identities = 32/120 (26%), Positives = 35/120 (29%), Gaps = 9/120 (7%)
 Frame = +3

Query: 579 Y*PXPPPXXXKX---PPPPXKKXGCFXKKNXXFXPPPXXXKKXGGXXFXXXXXXX-LFFX 746
           Y P PPP   K    PPPP         K   + PPP    K  G  +        +   
Sbjct: 291 YTPPPPPPTKKVVYTPPPPPPPP-----KKVVYTPPPTGILKDDGYHYGQPSVKFEVSAP 345

Query: 747 XXXXFXXPXPPPXKKXXCXFW-----PXKXXXXXXXXPPPPKXKXGXXXKKXXXXXXPPP 911
                    PPP KK           P K        PPPP        KK      PPP
Sbjct: 346 PAPKVEYLPPPPTKKVYVAPPVYVPPPTKKVVVYTPPPPPPPVYIPPPTKKVVVYTPPPP 405


>AY047513-1|AAK77245.1|  724|Drosophila melanogaster GH01880p
           protein.
          Length = 724

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 415 PRWVFXGKLPWGGXQFFLVGKKIXPQVVFQGKXE 314
           P W +   L WG    F VGK   P  +  GK +
Sbjct: 286 PEWFYTQILNWGKETHFFVGKTFQPAAIKAGKLD 319


>AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA
           protein.
          Length = 707

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 591 PPPXXXKXPPPPXKKXGCFXKKNXXFXPPPXXXKK 695
           PPP     PPPP K+   + K    F PP    +K
Sbjct: 260 PPPTPTYIPPPPKKQGYDYPKPAIPFPPPTAPPQK 294



 Score = 29.5 bits (63), Expect = 6.9
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 585 PXPPPXXXKXPPPPXKKXGCFXKKNXXFXPPP 680
           P PPP   K  PPP  K G    K     PPP
Sbjct: 206 PPPPPPTKKYLPPPQVKQGYDYPKPAIPFPPP 237



 Score = 29.5 bits (63), Expect = 6.9
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 585 PXPPPXXXKXPPPPXKKXGCFXKKNXXFXPPP 680
           P PPP   K  PPP  K G    K     PPP
Sbjct: 567 PPPPPPTSKYLPPPQVKQGYDYPKPAIPFPPP 598



 Score = 29.5 bits (63), Expect = 6.9
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 585 PXPPPXXXKXPPPPXKKXGCFXKKNXXFXPPP 680
           P PPP   K  PPP  K G    K     PPP
Sbjct: 615 PPPPPPTSKYLPPPQVKQGYDYPKPAIPFPPP 646



 Score = 29.1 bits (62), Expect = 9.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 585 PXPPPXXXKXPPPPXKKXGCFXKKNXXFXPPPXXXKK 695
           P PPP     PPP  K+   + K    F PP    +K
Sbjct: 207 PPPPPTKKYLPPPQVKQGYDYPKPAIPFPPPTNPPQK 243



 Score = 29.1 bits (62), Expect = 9.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 585 PXPPPXXXKXPPPPXKKXGCFXKKNXXFXPPPXXXKK 695
           P PPP     PPP  K+   + K    F PP    +K
Sbjct: 351 PPPPPTVKYLPPPQVKQGYDYPKPAVPFPPPTNPPQK 387



 Score = 29.1 bits (62), Expect = 9.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 585 PXPPPXXXKXPPPPXKKXGCFXKKNXXFXPPPXXXKK 695
           P PPP     PPP  K+   + K    F PP    +K
Sbjct: 568 PPPPPTSKYLPPPQVKQGYDYPKPAIPFPPPTAPPQK 604



 Score = 29.1 bits (62), Expect = 9.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 585 PXPPPXXXKXPPPPXKKXGCFXKKNXXFXPPPXXXKK 695
           P PPP     PPP  K+   + K    F PP    +K
Sbjct: 616 PPPPPTSKYLPPPQVKQGYDYPKPAIPFPPPTNPPQK 652


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,368,745
Number of Sequences: 53049
Number of extensions: 728979
Number of successful extensions: 2509
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2092
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4628299878
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)