Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F18
         (871 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0NG44 Cluster: ENSANGP00000030660; n=3; Culicidae|Rep:...    50   8e-05
UniRef50_Q0W687 Cluster: Putative uncharacterized protein; n=2; ...    34   5.4  

>UniRef50_A0NG44 Cluster: ENSANGP00000030660; n=3; Culicidae|Rep:
           ENSANGP00000030660 - Anopheles gambiae str. PEST
          Length = 213

 Score = 50.0 bits (114), Expect = 8e-05
 Identities = 35/90 (38%), Positives = 44/90 (48%)
 Frame = +1

Query: 559 HWLGLAENYPEPVQXLGWGGLSPEXNHXXREFFAGXNSW*GTXKKTGFX*FHXIDXXIXV 738
           +WLGLAENY EPV+  G   +                 W  T  ++G       D  + V
Sbjct: 34  NWLGLAENYSEPVRYAGVACILAGACLICTAMCC----WLHTPGRSGTNGDEG-DDPVHV 88

Query: 739 ISMPDEETMQQKPXXYDTVAGAPXTYDDAI 828
           IS  DE   ++KP  YDTVA AP +YDDAI
Sbjct: 89  ISANDERR-REKPPDYDTVAAAPPSYDDAI 117



 Score = 43.6 bits (98), Expect = 0.007
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +2

Query: 482 MSLXEGRQSQXAYRYGMVLLCAGXLITGWVWLKTTRNRCKXWGGVDC 622
           MSL E R++Q  YRYGM+LLC G L+  W+ L    +    + GV C
Sbjct: 8   MSLEETRRTQRPYRYGMMLLCVGALV-NWLGLAENYSEPVRYAGVAC 53


>UniRef50_Q0W687 Cluster: Putative uncharacterized protein; n=2;
           Archaea|Rep: Putative uncharacterized protein -
           Uncultured methanogenic archaeon RC-I
          Length = 179

 Score = 33.9 bits (74), Expect = 5.4
 Identities = 19/61 (31%), Positives = 27/61 (44%)
 Frame = +3

Query: 111 DRCYTPDEYEPPPAVL**RSLSVLARGLALAFIPATVQRRSPCEPLYVYPVSRVYIDAVY 290
           D   TP+++ PPPAV   R   +       +F+PAT  +  P      YP SR    +  
Sbjct: 114 DYYVTPEDFMPPPAV---REPELERPRQYFSFVPATFGKMPPATAAVTYPFSRAVATSTA 170

Query: 291 Y 293
           Y
Sbjct: 171 Y 171


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,841,994
Number of Sequences: 1657284
Number of extensions: 14058803
Number of successful extensions: 31095
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31066
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)