Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F18
         (871 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   4.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.5  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +3

Query: 357 CSIAKLYK*SLKIHWHSAG*RPN 425
           CS A  Y  SLKIH    G  PN
Sbjct: 292 CSYATKYCHSLKIHLRRYGHTPN 314


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 530 MVLLCAGXLITGWVWLKTTRNRCK 601
           +++  +G +    VW+ T  NRCK
Sbjct: 722 VMIAVSGLVYIATVWICTLMNRCK 745


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 619 IHPTPXFAPVPGSFQPDPASD 557
           IH  P + P P  F P+  SD
Sbjct: 383 IHRDPQYFPDPEKFDPERFSD 403


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = -1

Query: 685 GFLTRSXXQQKIPGQXDXXPGTIHPT 608
           G +     + + PG  +   G +HPT
Sbjct: 310 GMIVEMMRKNETPGMPNDFEGFVHPT 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,322
Number of Sequences: 336
Number of extensions: 3666
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)