Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F18
         (871 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein.              30   9.5  
L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein.              30   9.5  
AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein.          30   9.5  
AB177802-1|BAD16738.1| 1365|Homo sapiens fibrillin 1 protein.          30   9.5  

>X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein.
          Length = 3002

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 652 IPGQXDXXPGTIHPTPXFAPVPGSFQPDP 566
           IPG+ +  P  + P P   PVP  F P P
Sbjct: 526 IPGRPEYPPPPLGPIPPVLPVPPGFPPGP 554


>L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein.
          Length = 2871

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 652 IPGQXDXXPGTIHPTPXFAPVPGSFQPDP 566
           IPG+ +  P  + P P   PVP  F P P
Sbjct: 395 IPGRPEYPPPPLGPIPPVLPVPPGFPPGP 423


>AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein.
          Length = 2871

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 652 IPGQXDXXPGTIHPTPXFAPVPGSFQPDP 566
           IPG+ +  P  + P P   PVP  F P P
Sbjct: 395 IPGRPEYPPPPLGPIPPVLPVPPGFPPGP 423


>AB177802-1|BAD16738.1| 1365|Homo sapiens fibrillin 1 protein.
          Length = 1365

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 652 IPGQXDXXPGTIHPTPXFAPVPGSFQPDP 566
           IPG+ +  P  + P P   PVP  F P P
Sbjct: 395 IPGRPEYPPPPLGPIPPVLPVPPGFPPGP 423


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,309,740
Number of Sequences: 237096
Number of extensions: 2217509
Number of successful extensions: 4099
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4098
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)