Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F18
         (871 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF351129-1|AAL83921.1|  549|Drosophila melanogaster FMRFa recept...    30   4.8  
AE014296-529|AAF47700.1|  549|Drosophila melanogaster CG2114-PA ...    30   4.8  

>AF351129-1|AAL83921.1|  549|Drosophila melanogaster FMRFa receptor
           protein.
          Length = 549

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
 Frame = +1

Query: 421 RTXCVLAANSVTLEKYVWSRHVIXRRQTITXG-IQVWHGVVMC-----XXPNHWLGLAEN 582
           +T  +    +VTLE+YV   H +  R   T G  +++  V +C       P  W  L   
Sbjct: 204 QTASIYMTFTVTLERYVAVCHPLKARALCTYGRAKIYFIVCVCFSLAYNMPRFWEVLTVT 263

Query: 583 YPEP 594
           YPEP
Sbjct: 264 YPEP 267


>AE014296-529|AAF47700.1|  549|Drosophila melanogaster CG2114-PA
           protein.
          Length = 549

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
 Frame = +1

Query: 421 RTXCVLAANSVTLEKYVWSRHVIXRRQTITXG-IQVWHGVVMC-----XXPNHWLGLAEN 582
           +T  +    +VTLE+YV   H +  R   T G  +++  V +C       P  W  L   
Sbjct: 204 QTASIYMTFTVTLERYVAVCHPLKARALCTYGRAKIYFIVCVCFSLAYNMPRFWEVLTVT 263

Query: 583 YPEP 594
           YPEP
Sbjct: 264 YPEP 267


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,395,655
Number of Sequences: 53049
Number of extensions: 696869
Number of successful extensions: 1749
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1749
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)