Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F17
         (921 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361...    28   9.1  

>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
            3611984-3612217,3614113-3614138,3614446-3614633,
            3615707-3617670,3617938-3618423,3618527-3618894
          Length = 2207

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
 Frame = +3

Query: 369  DYWLDRHTGNRWIVSIWSTT---PHKQPPLDLTELNIEKLPIQFVAP--YHSDEYHEVLR 533
            D W+    G+ W+++ W  T    H +    L E+  E+L   F     YHS  Y+  + 
Sbjct: 1220 DRWVTEPLGDSWLLATWRATWYITHYREKRMLVEM--EELLCFFTVEHHYHSFAYNRKVI 1277

Query: 534  HESDLPPSISRQPLTSSQEYLEL 602
            H +    S+  +P+   Q ++ L
Sbjct: 1278 HNTH---SVGMKPIAIGQSFVLL 1297


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,017,744
Number of Sequences: 37544
Number of extensions: 391463
Number of successful extensions: 787
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)