Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F17
         (921 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060444-1|AAL25483.1|  162|Drosophila melanogaster LD47606p pro...   114   1e-25
AE014296-1228|AAF50580.1|  162|Drosophila melanogaster CG8600-PA...   114   1e-25

>AY060444-1|AAL25483.1|  162|Drosophila melanogaster LD47606p
           protein.
          Length = 162

 Score =  114 bits (275), Expect = 1e-25
 Identities = 62/141 (43%), Positives = 82/141 (58%), Gaps = 23/141 (16%)
 Frame = +3

Query: 270 GDFTPFYIAIAISSVILGFLLILNIVC-CCSRYSDYWLDRHTGNRWIVSIWSTTPHKQPP 446
           G+F+PFY+ IAI +V+LG ++ILNI+  CCS++  YW DRHTGNRW+VSIWS TPH QPP
Sbjct: 23  GNFSPFYVTIAICTVVLGTIIILNIILGCCSKHRKYWQDRHTGNRWLVSIWSATPHNQPP 82

Query: 447 LDLTELNIEK-------------------LPIQFVAPYHSDEYHEVLRHESDLPPSISRQ 569
           LD TEL                       + +  + P HS  +H   + +   PP    +
Sbjct: 83  LDFTELKDASYFQRFHPTTHQQVFPDDVVIGVDDLEPVHSAHHHH-HQQQHQRPPRPEGR 141

Query: 570 PL---TSSQEYLELQKRESDI 623
            L      +EY+ELQKRESDI
Sbjct: 142 TLHQQRQREEYVELQKRESDI 162


>AE014296-1228|AAF50580.1|  162|Drosophila melanogaster CG8600-PA
           protein.
          Length = 162

 Score =  114 bits (275), Expect = 1e-25
 Identities = 62/141 (43%), Positives = 82/141 (58%), Gaps = 23/141 (16%)
 Frame = +3

Query: 270 GDFTPFYIAIAISSVILGFLLILNIVC-CCSRYSDYWLDRHTGNRWIVSIWSTTPHKQPP 446
           G+F+PFY+ IAI +V+LG ++ILNI+  CCS++  YW DRHTGNRW+VSIWS TPH QPP
Sbjct: 23  GNFSPFYVTIAICTVVLGTIIILNIILGCCSKHRKYWQDRHTGNRWLVSIWSATPHNQPP 82

Query: 447 LDLTELNIEK-------------------LPIQFVAPYHSDEYHEVLRHESDLPPSISRQ 569
           LD TEL                       + +  + P HS  +H   + +   PP    +
Sbjct: 83  LDFTELKDASYFQRFHPTTHQQVFPDDVVIGVDDLEPVHSAHHHH-HQQQHQRPPRPEGR 141

Query: 570 PL---TSSQEYLELQKRESDI 623
            L      +EY+ELQKRESDI
Sbjct: 142 TLHQQRQREEYVELQKRESDI 162


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,299,762
Number of Sequences: 53049
Number of extensions: 692688
Number of successful extensions: 1558
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1556
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)