Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F16
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0566 + 26273708-26273805,26274855-26274983,26275581-262756...    29   5.0  
01_01_0376 + 2926426-2927040,2927150-2927239,2927674-2927892           29   6.6  

>04_04_0566 +
           26273708-26273805,26274855-26274983,26275581-26275685,
           26275794-26275869,26276437-26276511,26276638-26276740,
           26276879-26277008,26277266-26277363,26277920-26277996,
           26278262-26278375,26278984-26279103,26279533-26279661,
           26279946-26280024,26280757-26280875
          Length = 483

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 375 SVFVAQFTRAGQWKIAASGAAILNTQIFTFKIILILFCTMQM 250
           +V VA+   AG    + SGAA      FT K +L++FC + M
Sbjct: 2   AVTVARDVEAGGLDASTSGAADEKPSWFTPKRLLVMFCLINM 43


>01_01_0376 + 2926426-2927040,2927150-2927239,2927674-2927892
          Length = 307

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +3

Query: 294 KFEY*ESLLQMLRSSTVQLS*IAPRKPNSCIRTCWLKRLFMIRRY*N 434
           K E  E LL  L+S TV      P+K  SC R  W +   M+  Y N
Sbjct: 203 KEEALEILLASLKSKTVLTDVFLPKKKESCKRENWFRSDPMLSVYMN 249


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,434,695
Number of Sequences: 37544
Number of extensions: 183252
Number of successful extensions: 347
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)