Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F14
         (912 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          28   0.12 
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   4.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   7.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   7.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   7.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   7.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   7.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   7.6  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   7.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   7.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = +2

Query: 146 KNTLSNMVVKIYISGISGNKEVKKRQQRVLMILDSKNIKYEVIDITEPGXRVR*RFHA 319
           KN  S    + Y   +    E  KR       L S+  K +VID+T P  RV   +HA
Sbjct: 231 KNDSSKKKTRYYYRSVDDVIEKGKRPGAFRTTLGSELSKVKVIDMTGPQQRVLSGYHA 288


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 142 FEKYLIKHGCQNLYQWHFWQQGGEETSAAGPDD 240
           + + L K GC  L     W  GG  TS +G  +
Sbjct: 88  YTRDLPKEGCNFLKPVMVWIHGGGFTSGSGSSE 120


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 844 WLIVSLFYWRFFFCF 800
           WL  S F+ +FF C+
Sbjct: 412 WLSCSSFFQQFFHCY 426


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +3

Query: 330 KSSGGT-VSDPNPRSPLPPQMFNDEEYCGDYDQFDLA 437
           +SS GT   +PN  S  PP  ++  +    Y Q   A
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYA 58


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +3

Query: 330 KSSGGT-VSDPNPRSPLPPQMFNDEEYCGDYDQFDLA 437
           +SS GT   +PN  S  PP  ++  +    Y Q   A
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYA 58


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +3

Query: 330 KSSGGT-VSDPNPRSPLPPQMFNDEEYCGDYDQFDLA 437
           +SS GT   +PN  S  PP  ++  +    Y Q   A
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYA 58


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +3

Query: 330 KSSGGT-VSDPNPRSPLPPQMFNDEEYCGDYDQFDLA 437
           +SS GT   +PN  S  PP  ++  +    Y Q   A
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYA 58


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +3

Query: 330 KSSGGT-VSDPNPRSPLPPQMFNDEEYCGDYDQFDLA 437
           +SS GT   +PN  S  PP  ++  +    Y Q   A
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYA 58


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +3

Query: 330 KSSGGT-VSDPNPRSPLPPQMFNDEEYCGDYDQFDLA 437
           +SS GT   +PN  S  PP  ++  +    Y Q   A
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYA 58


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +3

Query: 330 KSSGGT-VSDPNPRSPLPPQMFNDEEYCGDYDQFDLA 437
           +SS GT   +PN  S  PP  ++  +    Y Q   A
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYA 58


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +3

Query: 330 KSSGGT-VSDPNPRSPLPPQMFNDEEYCGDYDQFDLA 437
           +SS GT   +PN  S  PP  ++  +    Y Q   A
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYA 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,396
Number of Sequences: 336
Number of extensions: 2627
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)