Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F12
         (922 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...   190   2e-48
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...   190   2e-48
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...   188   6e-48
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...   188   6e-48
Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...   165   3e-41
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...   165   3e-41
AF125459-8|AAD12840.2|  317|Caenorhabditis elegans Serpentine re...    29   3.5  
U80952-2|AAB38094.1|  309|Caenorhabditis elegans Muscle attachme...    29   4.7  
U80952-1|AAU20846.1|  315|Caenorhabditis elegans Muscle attachme...    29   4.7  
Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical pr...    29   6.2  
Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical pr...    29   6.2  
AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical ...    29   6.2  

>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score =  190 bits (462), Expect = 2e-48
 Identities = 81/135 (60%), Positives = 103/135 (76%), Gaps = 2/135 (1%)
 Frame = +3

Query: 252 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 425
           V   ++K P+K  IVWRNV LF  LHV    G Y  +F A W+T++F+  LY+ SG GIT
Sbjct: 33  VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92

Query: 426 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 605
           AGAHRLW+HKSYKA  P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93  AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152

Query: 606 FFFSHIGWLLLRKHP 650
           FFF+H+GWLL+RKHP
Sbjct: 153 FFFTHMGWLLVRKHP 167


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score =  190 bits (462), Expect = 2e-48
 Identities = 81/135 (60%), Positives = 103/135 (76%), Gaps = 2/135 (1%)
 Frame = +3

Query: 252 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 425
           V   ++K P+K  IVWRNV LF  LHV    G Y  +F A W+T++F+  LY+ SG GIT
Sbjct: 33  VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92

Query: 426 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 605
           AGAHRLW+HKSYKA  P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93  AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152

Query: 606 FFFSHIGWLLLRKHP 650
           FFF+H+GWLL+RKHP
Sbjct: 153 FFFTHMGWLLVRKHP 167


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score =  188 bits (457), Expect = 6e-48
 Identities = 81/131 (61%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
 Frame = +3

Query: 264 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 437
           ++K P+K  IVWRNV LF  LH     G Y  +F+A W+T IF   LY+  G GITAGAH
Sbjct: 38  SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97

Query: 438 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 617
           RLW+HKSYKA  P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98  RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157

Query: 618 HIGWLLLRKHP 650
           H+GWLL+RKHP
Sbjct: 158 HMGWLLVRKHP 168


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score =  188 bits (457), Expect = 6e-48
 Identities = 81/131 (61%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
 Frame = +3

Query: 264 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 437
           ++K P+K  IVWRNV LF  LH     G Y  +F+A W+T IF   LY+  G GITAGAH
Sbjct: 38  SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97

Query: 438 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 617
           RLW+HKSYKA  P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98  RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157

Query: 618 HIGWLLLRKHP 650
           H+GWLL+RKHP
Sbjct: 158 HMGWLLVRKHP 168


>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score =  165 bits (402), Expect = 3e-41
 Identities = 65/122 (53%), Positives = 91/122 (74%)
 Frame = +3

Query: 282 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 461
           +IVW+NV LF  LH+G + G Y  +F+A W T  +   L+    +G+T GAHRLWAH++Y
Sbjct: 37  EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96

Query: 462 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 641
           KA L  R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+  RG FF+H+GWLL++
Sbjct: 97  KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156

Query: 642 KH 647
           KH
Sbjct: 157 KH 158


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score =  165 bits (402), Expect = 3e-41
 Identities = 65/122 (53%), Positives = 91/122 (74%)
 Frame = +3

Query: 282 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 461
           +IVW+NV LF  LH+G + G Y  +F+A W T  +   L+    +G+T GAHRLWAH++Y
Sbjct: 37  EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96

Query: 462 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 641
           KA L  R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+  RG FF+H+GWLL++
Sbjct: 97  KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156

Query: 642 KH 647
           KH
Sbjct: 157 KH 158


>AF125459-8|AAD12840.2|  317|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 21 protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/49 (24%), Positives = 27/49 (55%)
 Frame = +3

Query: 75  LLIIRYSVRERLSVFQCSVKLIIISTLFQGKMPPQRKQEASWVLYETDA 221
           L I+ Y ++    V    + ++I++T+F+ K     +  + ++LY T+A
Sbjct: 27  LSILYYLIQASYLVLSAILNVLILNTIFKSKNKEHYRNNSFYILYTTEA 75


>U80952-2|AAB38094.1|  309|Caenorhabditis elegans Muscle attachment
           abnormal protein1, isoform a protein.
          Length = 309

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 168 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 278
           +PP    +A +  +      +P  +PPH PPS E  P
Sbjct: 66  LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 102


>U80952-1|AAU20846.1|  315|Caenorhabditis elegans Muscle attachment
           abnormal protein1, isoform b protein.
          Length = 315

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 168 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 278
           +PP    +A +  +      +P  +PPH PPS E  P
Sbjct: 72  LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 108


>Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical
           protein ZC247.1 protein.
          Length = 4404

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 584 PPQRNPRILLFPHWLVVVEEASRHAP 661
           PP R  R L  P W V   E +RH+P
Sbjct: 10  PPSRTGRELERPRWTVTRREETRHSP 35


>Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical
           protein ZC247.1 protein.
          Length = 4404

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 584 PPQRNPRILLFPHWLVVVEEASRHAP 661
           PP R  R L  P W V   E +RH+P
Sbjct: 10  PPSRTGRELERPRWTVTRREETRHSP 35


>AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical
           protein ZC247.1 protein.
          Length = 4404

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 584 PPQRNPRILLFPHWLVVVEEASRHAP 661
           PP R  R L  P W V   E +RH+P
Sbjct: 10  PPSRTGRELERPRWTVTRREETRHSP 35


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,266,648
Number of Sequences: 27780
Number of extensions: 415528
Number of successful extensions: 1305
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)