Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F11
         (912 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    64   1e-12
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    26   0.47 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.4  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    24   1.9  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    24   1.9  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   3.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   4.4  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   4.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   4.4  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   5.8  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   5.8  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 64.5 bits (150), Expect = 1e-12
 Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
 Frame = +3

Query: 480 TALEGTVCEPTLL-GIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSI 656
           T+ E +   P LL  +K  G+   T IQ  AIP +L GRDL+  A+TGSGKT AF++P I
Sbjct: 158 TSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPII 217

Query: 657 DLIYKLKFKPRNGTG-----VIILSPTREFQCNI 743
             +   K  P          V+I+SPTRE    I
Sbjct: 218 HNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQI 251


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 664 IRSIDGIKNASVFPEPVLAAPTRSLPSN 581
           I   D  +NA ++P+P    P R LP N
Sbjct: 89  IHIYDVHRNADIYPDPEKLDPDRFLPEN 116


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 640 NASVFPEPVLAAPTRSLPSN 581
           N +VFP+P    P R LP N
Sbjct: 397 NPNVFPDPEKFDPDRFLPEN 416


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 640 NASVFPEPVLAAPTRSLPSN 581
           N +VFP+P    P R LP N
Sbjct: 397 NPNVFPDPEKFDPDRFLPEN 416


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 640 NASVFPEPVLAAPTRSLPSNK 578
           N   FPEP    P R LP N+
Sbjct: 95  NEKYFPEPEKFDPNRYLPENQ 115


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 721 VGDKMMTPVPF-LGLNFSLYIRSIDGIKNASVFPEPVLAAPTRSLPSN 581
           +G+ M+T   + L     L +   D   N  ++PEP    P R LP N
Sbjct: 69  LGEDMVTTTGYKLRKGTILQLHIYDLHYNPVIYPEPEKFDPDRFLPEN 116


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 670 LYIRSIDGIKNASVFPEPVLAAPTRSLPSN 581
           +++   D   N  V+P+P    P R LP N
Sbjct: 86  VHLHIYDMHHNPQVYPDPEKFDPDRFLPEN 115


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 640 NASVFPEPVLAAPTRSLPSN 581
           N +++P+P    P R LP N
Sbjct: 413 NPAIYPDPEKFDPDRFLPEN 432


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 670 LYIRSIDGIKNASVFPEPVLAAPTRSLP 587
           L+I   D  +NA ++P+ +   P R LP
Sbjct: 86  LHIHIFDLHRNAEIYPDLLKFDPDRFLP 113


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 640 NASVFPEPVLAAPTRSLPSN 581
           N +++P+P    P R LP N
Sbjct: 413 NPAIYPDPEKFDPDRFLPEN 432


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 186 KTDSNPEPEKDIEALNNEKEAKKRVVQDGDTNG 284
           K   N  P     +L   K +K+    +GDTNG
Sbjct: 57  KNPPNLNPAVQGSSLTEGKRSKRSKRPNGDTNG 89


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 640 NASVFPEPVLAAPTRSLPSN 581
           N  ++P+P    P R LP N
Sbjct: 97  NPDIYPDPEKFDPDRFLPEN 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,473
Number of Sequences: 336
Number of extensions: 2683
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)