Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_F11
(912 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 116 2e-26
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 79 4e-15
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 66 4e-11
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 65 6e-11
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 65 6e-11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 62 4e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 62 4e-10
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 58 7e-09
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 58 9e-09
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 58 9e-09
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 55 8e-08
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 55 8e-08
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 54 1e-07
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 52 6e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 52 8e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 52 8e-07
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 52 8e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 51 1e-06
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 49 4e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 49 4e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 49 5e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 49 5e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 48 7e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 48 7e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 48 7e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 48 7e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 48 7e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 48 7e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 48 1e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 48 1e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 48 1e-05
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 46 3e-05
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 46 3e-05
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 46 5e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 46 5e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 45 7e-05
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 42 5e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 42 5e-04
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 42 6e-04
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 39 0.006
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 38 0.010
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 37 0.023
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 36 0.053
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF025458-2|AAB70978.1| 557|Caenorhabditis elegans Hypothetical ... 29 6.1
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 28 8.1
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 116 bits (279), Expect = 2e-26
Identities = 58/106 (54%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
Frame = +3
Query: 462 LSDQKFTALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAF 641
L+ F +LEG V L ++ +GF TMTEIQAK+I PLLEG+D++ +AKTGSGKTLAF
Sbjct: 63 LTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAF 122
Query: 642 LIPSIDLIYKLKFKPRNGTGVIILSPTREFQC-NIGVLMDCDPGGH 776
L+P+I+L++KL +K NGTGVII+SPTRE GVL + G +
Sbjct: 123 LLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSN 168
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 79.0 bits (186), Expect = 4e-15
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +3
Query: 510 TLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPR 689
TL G+KD + TEIQ I L G D+VGAAKTGSGKTLA +IP ++ +++ K+ P
Sbjct: 87 TLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPD 146
Query: 690 NGTGVIILSPTRE 728
G G +I+SPTRE
Sbjct: 147 YGLGALIISPTRE 159
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 65.7 bits (153), Expect = 4e-11
Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSI-DLIYKLKFKPRNGT 698
+K + T IQA+AIP ++ GRD++G AKTGSGKTLAFL+P ++ + + + +G
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGP 378
Query: 699 GVIILSPTRE 728
+IL+PTRE
Sbjct: 379 IAVILAPTRE 388
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 65.3 bits (152), Expect = 6e-11
Identities = 39/94 (41%), Positives = 55/94 (58%)
Frame = +3
Query: 462 LSDQKFTALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAF 641
++ +KF+ L VC ++ M T T +QA IP +LEG D++G A+TG+GKTLAF
Sbjct: 86 MTTKKFSQLG--VCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAF 143
Query: 642 LIPSIDLIYKLKFKPRNGTGVIILSPTREFQCNI 743
IP ++ KL P G +IL+PTRE I
Sbjct: 144 AIP---ILQKLSVDP-YGIYALILTPTRELAFQI 173
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 65.3 bits (152), Expect = 6e-11
Identities = 39/94 (41%), Positives = 55/94 (58%)
Frame = +3
Query: 462 LSDQKFTALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAF 641
++ +KF+ L VC ++ M T T +QA IP +LEG D++G A+TG+GKTLAF
Sbjct: 86 MTTKKFSQLG--VCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAF 143
Query: 642 LIPSIDLIYKLKFKPRNGTGVIILSPTREFQCNI 743
IP ++ KL P G +IL+PTRE I
Sbjct: 144 AIP---ILQKLSVDP-YGIYALILTPTRELAFQI 173
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 62.5 bits (145), Expect = 4e-10
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPRNGTG 701
I+ GF T IQ K IP +++G+D+V ++TGSGKT AF+IP ++ KLK + G
Sbjct: 39 IEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIP---MLQKLKRRDTTGIR 95
Query: 702 VIILSPTRE 728
+++SPTRE
Sbjct: 96 ALMVSPTRE 104
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 62.5 bits (145), Expect = 4e-10
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPRNGTG 701
I+ GF T IQ K IP +++G+D+V ++TGSGKT AF+IP ++ KLK + G
Sbjct: 39 IEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIP---MLQKLKRRDTTGIR 95
Query: 702 VIILSPTRE 728
+++SPTRE
Sbjct: 96 ALMVSPTRE 104
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.5 bits (140), Expect = 2e-09
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPRN--- 692
+K++G++ T IQ +AIP L+ RD++G A+TGSGKT AFL+P + I L R
Sbjct: 316 VKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHR 375
Query: 693 --GTGVIILSPTRE 728
G II++PTRE
Sbjct: 376 DLGPYAIIMAPTRE 389
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 58.4 bits (135), Expect = 7e-09
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Frame = +3
Query: 525 KDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIP----SIDLIYKLKFKPRN 692
K G VT T IQ + IP L GRD++G A TGSGKT+ F++P ++ KL F
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE 265
Query: 693 GTGVIILSPTRE 728
G +I+ P+RE
Sbjct: 266 GPFGLIIVPSRE 277
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 58.0 bits (134), Expect = 9e-09
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +3
Query: 549 TEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSI-DLIYKLKFKPRNGTGVIILSPTR 725
T IQA AIP L GRD++G AKTGSGKT A+L P+I ++ + K G +I+ PTR
Sbjct: 289 TPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTR 348
Query: 726 EFQCNI 743
E +
Sbjct: 349 ELAIQV 354
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 58.0 bits (134), Expect = 9e-09
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Frame = +3
Query: 468 DQKFTALEGTVCEPTLLG-IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFL 644
D + T+ + PT+L +K + + + IQ IP +L+G D++G A+T +GKT AF
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 645 IPSIDLIYKLKFKPRN------GTGVIILSPTREFQCNI 743
+P ID I ++ + RN G +IL+PTRE I
Sbjct: 437 LPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQI 475
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +3
Query: 537 FVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPR-NGTGVIIL 713
F T IQ+ + P + GRD++ AKTGSGKTLAF++P++ I K + R G V++L
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVL 208
Query: 714 SPTRE 728
PTRE
Sbjct: 209 LPTRE 213
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 57.2 bits (132), Expect = 2e-08
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +3
Query: 507 PTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKP 686
P LL + D + + T++Q + LL D+V + TGSGKTLAF++P + +I K +P
Sbjct: 19 PELLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQP 78
Query: 687 RNGTGVIILSPTRE 728
+ G +ILSP+RE
Sbjct: 79 AD-IGALILSPSRE 91
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 54.8 bits (126), Expect = 8e-08
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +3
Query: 498 VCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLK 677
V +P + +G++ ++IQ A+P L+G+D++G A+TGSGKT AF IP ++ L
Sbjct: 51 VSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIP---VLQSLL 107
Query: 678 FKPRNGTGVIILSPTREFQCNIG 746
P+ ++L+PTRE IG
Sbjct: 108 DHPQ-AFFCLVLTPTRELAFQIG 129
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 54.8 bits (126), Expect = 8e-08
Identities = 33/80 (41%), Positives = 46/80 (57%)
Frame = +3
Query: 504 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFK 683
E L GI GF + IQ +AIP +L+ RD++ A++G+GKT F SI ++ L +
Sbjct: 35 EDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATF---SISVLQSLDTQ 91
Query: 684 PRNGTGVIILSPTREFQCNI 743
R T +ILSPTRE I
Sbjct: 92 VRE-TQALILSPTRELAVQI 110
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 54.4 bits (125), Expect = 1e-07
Identities = 32/80 (40%), Positives = 46/80 (57%)
Frame = +3
Query: 504 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFK 683
E L GI GF + IQ +A+P +L+ RD++ A++G+GKT F SI ++ L +
Sbjct: 35 EDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATF---SISVLQSLDTQ 91
Query: 684 PRNGTGVIILSPTREFQCNI 743
R T +ILSPTRE I
Sbjct: 92 VRE-TQALILSPTRELAVQI 110
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 52.0 bits (119), Expect = 6e-07
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Frame = +3
Query: 513 LLGIKDMGFVTMTEIQAKAIPPLLEGR-DLVGAAKTGSGKTLAFLIP-------SIDLIY 668
L I+ MGF TEIQ+ +P + R D++GAA+TGSGKTLAF IP S D
Sbjct: 167 LEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQ 226
Query: 669 KLKFKPRNGTGVIILSPTREFQCNI 743
+ + G +I++PTRE I
Sbjct: 227 ETESTEVRGPRALIVAPTRELVIQI 251
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 51.6 bits (118), Expect = 8e-07
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPS---IDL----IYKLKF 680
I+ GF + IQ++ P LL G+D +G ++TGSGKTLAFL+P+ ID K
Sbjct: 99 IRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDE 158
Query: 681 KPRNGTGVIILSPTRE 728
+ + V++LSPTRE
Sbjct: 159 EQKPSPFVLVLSPTRE 174
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 51.6 bits (118), Expect = 8e-07
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +3
Query: 504 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSID-LIYKLKF 680
E L I ++G+ ++Q I LE ++++G A+TGSGKT AFLIP + LI + K
Sbjct: 98 ERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKT 157
Query: 681 KPRN-GTGVIILSPTRE 728
+ G +I++PT+E
Sbjct: 158 NDGSVGPSAVIIAPTKE 174
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 51.6 bits (118), Expect = 8e-07
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 534 GFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSID-LIYKLKFKPRNGTGVII 710
G+ T IQ IP L G+D+ A TG+GKT AF++P ++ +IY+ K + T V++
Sbjct: 167 GYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLV 224
Query: 711 LSPTREFQCNI 743
L PTRE +
Sbjct: 225 LVPTRELAIQV 235
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLI 665
IK G+ T +Q +IP L GRDL+ A+TGSGKT AFL+P ++ I
Sbjct: 181 IKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAI 228
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Frame = +3
Query: 507 PTLLG-IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLK-- 677
P+LL + + + IQ ++IP + E R+++ +A TGSGKTLAF +P ID I +LK
Sbjct: 135 PSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQR 194
Query: 678 --FKPRNGTGV--IILSPTRE 728
+ N + + ++L PTRE
Sbjct: 195 ADYSSSNSSKLLAVVLEPTRE 215
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSID-LIYK--LKFKPRN 692
++ G+ T IQ +P + +G+D++ A+TGSGKT AFL+P + LI + L +
Sbjct: 313 VERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEG 372
Query: 693 G--TGVIILSPTRE 728
G IIL+PTRE
Sbjct: 373 GCYPRCIILTPTRE 386
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSID-LIYK--LKFKPRN 692
++ G+ T IQ +P + +G+D++ A+TGSGKT AFL+P + LI + L +
Sbjct: 313 VERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEG 372
Query: 693 G--TGVIILSPTRE 728
G IIL+PTRE
Sbjct: 373 GCYPRCIILTPTRE 386
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPRNGTG 701
+K M T IQ + P++ G D+V A TGSGKTLAFLIP + + + K R+ T
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTD 810
Query: 702 ------VIILSPTRE 728
++I++PTRE
Sbjct: 811 EKPSPRLLIVAPTRE 825
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPRNGTG 701
+K M T IQ + P++ G D+V A TGSGKTLAFLIP + + + K R+ T
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTD 810
Query: 702 ------VIILSPTRE 728
++I++PTRE
Sbjct: 811 EKPSPRLLIVAPTRE 825
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 48.4 bits (110), Expect = 7e-06
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +3
Query: 480 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSID 659
T E + E + G+ T IQ A+P + +G D++ A+TGSGKT AFL+P +
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMT 401
Query: 660 LIYKLKFKPRNGTG-----VIILSPTRE 728
+ G G IIL+PTRE
Sbjct: 402 RLIDDNNLNTAGEGGCYPRCIILTPTRE 429
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 48.4 bits (110), Expect = 7e-06
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +3
Query: 480 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSID 659
T E + E + G+ T IQ A+P + +G D++ A+TGSGKT AFL+P +
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMT 401
Query: 660 LIYKLKFKPRNGTG-----VIILSPTRE 728
+ G G IIL+PTRE
Sbjct: 402 RLIDDNNLNTAGEGGCYPRCIILTPTRE 429
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 48.4 bits (110), Expect = 7e-06
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +3
Query: 480 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSID 659
T E + E + G+ T IQ A+P + +G D++ A+TGSGKT AFL+P +
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMT 401
Query: 660 LIYKLKFKPRNGTG-----VIILSPTRE 728
+ G G IIL+PTRE
Sbjct: 402 RLIDDNNLNTAGEGGCYPRCIILTPTRE 429
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 48.4 bits (110), Expect = 7e-06
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Frame = +3
Query: 534 GFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSI--------DLIYKLKFKPR 689
G+ T +Q +IP LL RDL+ A+TGSGKT AFL+P I D++ F
Sbjct: 158 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNG 217
Query: 690 NGT---GVIILSPTREFQCNI 743
T ++LSPTRE I
Sbjct: 218 RRTYYPCALVLSPTRELAIQI 238
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 48.4 bits (110), Expect = 7e-06
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Frame = +3
Query: 534 GFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSI--------DLIYKLKFKPR 689
G+ T +Q +IP LL RDL+ A+TGSGKT AFL+P I D++ F
Sbjct: 142 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNG 201
Query: 690 NGT---GVIILSPTREFQCNI 743
T ++LSPTRE I
Sbjct: 202 RRTYYPCALVLSPTRELAIQI 222
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 48.4 bits (110), Expect = 7e-06
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Frame = +3
Query: 534 GFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSI--------DLIYKLKFKPR 689
G+ T +Q +IP LL RDL+ A+TGSGKT AFL+P I D++ F
Sbjct: 139 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNG 198
Query: 690 NGT---GVIILSPTREFQCNI 743
T ++LSPTRE I
Sbjct: 199 RRTYYPCALVLSPTRELAIQI 219
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +3
Query: 480 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSID 659
T E + E + G+ T IQ +P + +G D++ A+TGSGKT AFL+P +
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMA 612
Query: 660 LIYKLKFKPRNGTG-----VIILSPTRE 728
+ G G IIL+PTRE
Sbjct: 613 RLIDENDLNTAGEGGCYPRCIILTPTRE 640
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +3
Query: 480 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSID 659
T E + E + G+ T IQ +P + +G D++ A+TGSGKT AFL+P +
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMA 612
Query: 660 LIYKLKFKPRNGTG-----VIILSPTRE 728
+ G G IIL+PTRE
Sbjct: 613 RLIDENDLNTAGEGGCYPRCIILTPTRE 640
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +3
Query: 480 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSID 659
T E + E + G+ T IQ +P + +G D++ A+TGSGKT AFL+P +
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMA 612
Query: 660 LIYKLKFKPRNGTG-----VIILSPTRE 728
+ G G IIL+PTRE
Sbjct: 613 RLIDENDLNTAGEGGCYPRCIILTPTRE 640
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = +3
Query: 504 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFK 683
E L GI GF + IQ +AI P G+D++ A++G+GKT F S+ ++ ++ +
Sbjct: 38 EELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF---SVSILQRIDHE 94
Query: 684 PRNGTGVIILSPTREFQCNIGVLM 755
+ ++++PTRE I +M
Sbjct: 95 DPH-VQALVMAPTRELAQQIQKVM 117
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = +3
Query: 504 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFK 683
E L GI GF + IQ +AI P G+D++ A++G+GKT F S+ ++ ++ +
Sbjct: 38 EELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF---SVSILQRIDHE 94
Query: 684 PRNGTGVIILSPTREFQCNIGVLM 755
+ ++++PTRE I +M
Sbjct: 95 DPH-VQALVMAPTRELAQQIQKVM 117
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/80 (33%), Positives = 46/80 (57%)
Frame = +3
Query: 504 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFK 683
+ TL +K+ F + +QA+AIP L GRD++ AK+G+GKTL F + +++ +
Sbjct: 31 QKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSH 90
Query: 684 PRNGTGVIILSPTREFQCNI 743
+ +I++PTRE I
Sbjct: 91 IQK----VIVTPTREISVQI 106
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/80 (33%), Positives = 46/80 (57%)
Frame = +3
Query: 504 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFK 683
+ TL +K+ F + +QA+AIP L GRD++ AK+G+GKTL F + +++ +
Sbjct: 31 QKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSH 90
Query: 684 PRNGTGVIILSPTREFQCNI 743
+ +I++PTRE I
Sbjct: 91 IQK----VIVTPTREISVQI 106
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 45.2 bits (102), Expect = 7e-05
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Frame = +3
Query: 537 FVTMTEIQAKAIPPLLEGR-DLVGAAKTGSGKTLAFLIP-------SIDLIYKLKFKPRN 692
F TEIQ+ +P + R D++GAA+TGSGKTLAF IP S D + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 693 GTGVIILSPTREFQCNI 743
G +I++PTRE I
Sbjct: 68 GPRALIVAPTRELVIQI 84
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 45.2 bits (102), Expect = 7e-05
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIY-KLKFKPRNGT 698
+ + + T +Q++AIP +L G D + AA+TGSGKT AF +P +++ + K ++
Sbjct: 17 LSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQIVWERRKSAEKSQN 76
Query: 699 GVIILSPTREFQCN 740
+REFQ N
Sbjct: 77 SGQKPENSREFQLN 90
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 42.3 bits (95), Expect = 5e-04
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 513 LLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPRN 692
L I D GF +E+Q + IP + G D+V AK+G GKT F+I ++ + +P +
Sbjct: 53 LRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQ-----QLEPVD 107
Query: 693 G-TGVIILSPTREFQCNI 743
G V+ + TRE I
Sbjct: 108 GEVSVVCMCHTRELAFQI 125
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 42.3 bits (95), Expect = 5e-04
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 513 LLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPRN 692
L I D GF +E+Q + IP + G D+V AK+G GKT F+I ++ + +P +
Sbjct: 53 LRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQ-----QLEPVD 107
Query: 693 G-TGVIILSPTREFQCNI 743
G V+ + TRE I
Sbjct: 108 GEVSVVCMCHTRELAFQI 125
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 42.3 bits (95), Expect = 5e-04
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 513 LLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPRN 692
L I D GF +E+Q + IP + G D+V AK+G GKT F+I ++ + +P +
Sbjct: 52 LRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQ-----QLEPVD 106
Query: 693 G-TGVIILSPTREFQCNI 743
G V+ + TRE I
Sbjct: 107 GEVSVVCMCHTRELAFQI 124
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 513 LLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPR- 689
L+GI + G+ + IQ +I L G+D++ AK G+GKT A+ IP I+ K +P
Sbjct: 55 LMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIE-----KIQPAL 109
Query: 690 NGTGVIILSPTRE 728
+++ PTRE
Sbjct: 110 KAIQAMVIVPTRE 122
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +3
Query: 522 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYK 671
+K + T +Q +I + EGR LV A TG GKT AFLIP+I+ K
Sbjct: 108 LKCVHVTTFNAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALK 157
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 555 IQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSID 659
+Q +I + EGR LV A TG GKT AFLIP+I+
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 53
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +3
Query: 504 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFK 683
E L GI GF + IQ A+ P G+D+ ++ GSGKT +I ID++ + +
Sbjct: 5 EELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKT---VISLIDILQGIDCE 61
Query: 684 PRNGTGVIILSPTR 725
+ VI+L+P R
Sbjct: 62 DAH-LQVILLAPQR 74
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 36.7 bits (81), Expect = 0.023
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 546 MTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSIDL 662
+ +Q K+I + + R L+ A TG GKT AFLIP+I++
Sbjct: 115 LNAVQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEI 153
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.5 bits (78), Expect = 0.053
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 573 PPLLEGRDLVGAAKTGSGKTLAFLIPSIDLIYKLKFKPRNGTGVIILSPTREFQCNI 743
PP L RD+ AA TGSGKT+ +++P ++ + KP +IL P + I
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLP---VLAAVGSKPSKILQAVILVPVQTLVAQI 204
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 558 QAKAIPPLLEGRDLVGAAKTGSGKT 632
Q + + P LEG++ V A TGSGKT
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKT 399
>AF025458-2|AAB70978.1| 557|Caenorhabditis elegans Hypothetical
protein C01B12.5 protein.
Length = 557
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 436 LDQASA*VYYQIKNSLHWKAQCVNQLF*ELKIWAL 540
LD A++ ++ QIK L WK ++ EL IW L
Sbjct: 7 LDVATSGLFTQIKVLLRWKGSVWKSIWSELLIWLL 41
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 597 LVGAAKTGSGKTLAFLIPSIDLIYKLKFKPRNGTGV 704
L + KT GKT+ I + D + LKFK +N GV
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGV 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,036,973
Number of Sequences: 27780
Number of extensions: 240509
Number of successful extensions: 700
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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