Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F08
         (876 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-109|AAF52120.1|  701|Drosophila melanogaster CG1078-PA ...    36   0.097
AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone rece...    32   1.2  
AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ...    32   1.2  
AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC...    32   1.2  

>AE014297-109|AAF52120.1|  701|Drosophila melanogaster CG1078-PA
           protein.
          Length = 701

 Score = 35.5 bits (78), Expect = 0.097
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
 Frame = +3

Query: 402 VKVTIGEIKSGSQYASLNIKRGVGLVASAGGPXKXRSVTT-TSGKVTLXDLXGPEVLMGV 578
           + V IG+IK     ++ NIK+   L+A   G    ++     +GK ++ D  G   + GV
Sbjct: 158 INVVIGDIKQAP--STYNIKQRPNLLAGGTGAAGDKAKPAGQAGKFSIEDFEGAGTINGV 215

Query: 579 PALXFIL-IL*XXXXE*PGC*XFXLFHYXFNEVHGTPXCER 698
               F +  L       PG      F+Y FNE      CER
Sbjct: 216 AVHEFSIDSLEEKPWRKPGADITDYFNYGFNEETWRAYCER 256


>AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone receptor
            4 protein.
          Length = 1518

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 387  PSQSHRSLGYQRHHFDPRALPQQNAHHLI-PNRYYLPLHLDFLRQHHRRRR 238
            P   H   G+Q HH   +  PQ + HHL+ P +  L   +    QH ++++
Sbjct: 1061 PLHHHHHQGHQSHHAQQQHHPQLSPHHLLSPQQQQLAAAVAAAAQHQQQQQ 1111


>AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2
            protein.
          Length = 1464

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 387  PSQSHRSLGYQRHHFDPRALPQQNAHHLI-PNRYYLPLHLDFLRQHHRRRR 238
            P   H   G+Q HH   +  PQ + HHL+ P +  L   +    QH ++++
Sbjct: 1006 PLHHHHHQGHQSHHAQQQHHPQLSPHHLLSPQQQQLAAAVAAAAQHQQQQQ 1056


>AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC
            protein.
          Length = 1518

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 387  PSQSHRSLGYQRHHFDPRALPQQNAHHLI-PNRYYLPLHLDFLRQHHRRRR 238
            P   H   G+Q HH   +  PQ + HHL+ P +  L   +    QH ++++
Sbjct: 1061 PLHHHHHQGHQSHHAQQQHHPQLSPHHLLSPQQQQLAAAVAAAAQHQQQQQ 1111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,862,516
Number of Sequences: 53049
Number of extensions: 554487
Number of successful extensions: 1435
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)