Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_F07
(915 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 152 3e-37
09_06_0213 - 21610887-21611198 152 3e-37
09_04_0227 + 15861410-15861721 152 3e-37
07_03_0825 + 21773710-21774021 152 3e-37
05_05_0150 + 22758060-22758371 152 3e-37
05_05_0128 - 22591720-22592031 152 3e-37
04_04_0926 - 29462363-29462674 152 3e-37
03_01_0134 + 1060551-1060862 152 3e-37
02_05_0333 - 28012829-28013140 152 3e-37
01_06_1262 + 35833882-35834193 152 3e-37
05_05_0130 - 22598744-22599043,22599296-22599307 124 1e-28
04_01_0619 - 8125611-8127967,8128449-8130123 30 2.9
02_05_0591 - 30183105-30183869 28 9.0
>10_08_0780 - 20500344-20500655
Length = 103
Score = 152 bits (369), Expect = 3e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>09_06_0213 - 21610887-21611198
Length = 103
Score = 152 bits (369), Expect = 3e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>09_04_0227 + 15861410-15861721
Length = 103
Score = 152 bits (369), Expect = 3e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>07_03_0825 + 21773710-21774021
Length = 103
Score = 152 bits (369), Expect = 3e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>05_05_0150 + 22758060-22758371
Length = 103
Score = 152 bits (369), Expect = 3e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>05_05_0128 - 22591720-22592031
Length = 103
Score = 152 bits (369), Expect = 3e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>04_04_0926 - 29462363-29462674
Length = 103
Score = 152 bits (369), Expect = 3e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>03_01_0134 + 1060551-1060862
Length = 103
Score = 152 bits (369), Expect = 3e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>02_05_0333 - 28012829-28013140
Length = 103
Score = 152 bits (369), Expect = 3e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>01_06_1262 + 35833882-35834193
Length = 103
Score = 152 bits (369), Expect = 3e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 124 bits (299), Expect = 1e-28
Identities = 60/77 (77%), Positives = 67/77 (87%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 327
V R IQGI KP IRRLAR+GGVKRISGLIY+ETR VL++FL+NVI DA+TYTEHA RKT
Sbjct: 22 VFRGYIQGIAKPVIRRLARKGGVKRISGLIYKETRGVLEIFLKNVICDAITYTEHAHRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
V AMDVVYALK QGRT+
Sbjct: 82 VMAMDVVYALKLQGRTI 98
>04_01_0619 - 8125611-8127967,8128449-8130123
Length = 1343
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 165 SRNNEACHSKIGATRRRQTYIRPDLRGNTQRSKGFSRERYPGRGYLHRAR 314
+ NN + S+ T Q+Y R + RSK R R+PG+ + R R
Sbjct: 553 NNNNFSAASRAAVTS--QSYAAASWRSHPSRSKAARRRRWPGQAWSQRMR 600
>02_05_0591 - 30183105-30183869
Length = 254
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 220 RISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQG 369
+IS E + + ++ + +A + +RKT+TA DV++A+ R G
Sbjct: 55 KISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSRLG 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,236,549
Number of Sequences: 37544
Number of extensions: 182992
Number of successful extensions: 462
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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