Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F05
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122174-1|AAM52686.1|  877|Drosophila melanogaster LD34142p pro...    32   0.93 
AE014298-1168|AAF46366.1|  926|Drosophila melanogaster CG10555-P...    32   0.93 
AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA...    32   0.93 
AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB...    32   0.93 

>AY122174-1|AAM52686.1|  877|Drosophila melanogaster LD34142p
           protein.
          Length = 877

 Score = 32.3 bits (70), Expect = 0.93
 Identities = 18/51 (35%), Positives = 19/51 (37%)
 Frame = +1

Query: 466 GGGXGXFXXXKXXPPPXXXGXFFXGPXPXXPXKXPGPRXXGGGGXFPXPXG 618
           GGG G     +  PPP        G  P  P     P   GGGG  P P G
Sbjct: 158 GGGGGGHMGMRGPPPP---APHLRGMPPGGPPPTQQPGGAGGGGGPPPPYG 205


>AE014298-1168|AAF46366.1|  926|Drosophila melanogaster CG10555-PA
           protein.
          Length = 926

 Score = 32.3 bits (70), Expect = 0.93
 Identities = 29/111 (26%), Positives = 35/111 (31%), Gaps = 4/111 (3%)
 Frame = +1

Query: 505 PPPXXXGXFFXGPXPXXPX-KXPGPRXXGGGGXFPXPXGGXXFXPKXXGXXXKKIFXKXX 681
           PP    G +  GP          G +   G G  P P  G    P            +  
Sbjct: 498 PPNAAQGGYHHGPAGAATGASGHGYQPNAGAGQGPPP--GAYPPPPGSQQVPPVPGQQQP 555

Query: 682 PKGPXXXKXALLGGFXXXPPPPXKXKKXPPXXX---GGNPXKXKTGFPENP 825
           P GP        GG    PP P + +  PP      GG P     G+P NP
Sbjct: 556 PPGPPPPGQPPTGGQQQPPPGPPQSQYGPPPPQNSAGGPPPMGYAGYPPNP 606



 Score = 29.9 bits (64), Expect = 5.0
 Identities = 28/102 (27%), Positives = 31/102 (30%), Gaps = 5/102 (4%)
 Frame = +2

Query: 503 PPPPGXXGFFFXAXXPXPPXKXXAPGFXGGGGXFXXPXGGXSFXXKXGXXPXKKFXXXGP 682
           PPPPG            PP     PG    GG    P G      + G  P +      P
Sbjct: 538 PPPPGSQQVPPVPGQQQPPPGPPPPGQPPTGGQQQPPPGPPQ--SQYGPPPPQNSAGGPP 595

Query: 683 QKG-----PXPXXXPXWGVXXXGPPPRXKXKKXPPXSXGATP 793
             G     P P      G    GPPP       PP S   +P
Sbjct: 596 PMGYAGYPPNPGQYGQAGAGG-GPPPSGYWPPPPPTSSAQSP 636


>AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA,
            isoform A protein.
          Length = 2061

 Score = 32.3 bits (70), Expect = 0.93
 Identities = 18/51 (35%), Positives = 19/51 (37%)
 Frame = +1

Query: 466  GGGXGXFXXXKXXPPPXXXGXFFXGPXPXXPXKXPGPRXXGGGGXFPXPXG 618
            GGG G     +  PPP        G  P  P     P   GGGG  P P G
Sbjct: 1342 GGGGGGHMGMRGPPPP---APHLRGMPPGGPPPTQQPGGAGGGGGPPPPYG 1389


>AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB,
            isoform B protein.
          Length = 2103

 Score = 32.3 bits (70), Expect = 0.93
 Identities = 18/51 (35%), Positives = 19/51 (37%)
 Frame = +1

Query: 466  GGGXGXFXXXKXXPPPXXXGXFFXGPXPXXPXKXPGPRXXGGGGXFPXPXG 618
            GGG G     +  PPP        G  P  P     P   GGGG  P P G
Sbjct: 1384 GGGGGGHMGMRGPPPP---APHLRGMPPGGPPPTQQPGGAGGGGGPPPPYG 1431


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,585,135
Number of Sequences: 53049
Number of extensions: 568930
Number of successful extensions: 2345
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2065
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)