Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F04
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666...    29   5.0  
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688...    28   8.7  

>07_03_1220 -
           24966169-24966327,24966421-24966552,24966639-24966693,
           24967496-24967667,24967771-24967918,24968015-24968050
          Length = 233

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 21/64 (32%), Positives = 34/64 (53%)
 Frame = +1

Query: 439 CELKKSKYSRCTITKSMDRFLHYLASPKYSLDVCIYVFTNSDIANVLLKLHYKGIKIRII 618
           CE+  S   R    KSM     Y+ S  Y +++ I    +S + +VLL+    GIK++I+
Sbjct: 136 CEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYI----DSAVRHVLLRQGVLGIKVKIM 191

Query: 619 IDAD 630
           +D D
Sbjct: 192 LDWD 195


>01_03_0103 - 12567986-12568141,12568307-12568442,12568751-12568824,
            12568932-12569175,12569480-12569766,12570618-12571103,
            12571348-12571459,12571540-12571745,12573071-12573276,
            12573831-12574162,12574284-12574825,12574967-12576308,
            12576386-12576457,12578438-12578505,12579011-12580174
          Length = 1808

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 781  VIELDQSGTLRKLGECSGDITS*SCKPV 864
            V +L   GTLR +GEC+ ++ +  C P+
Sbjct: 1103 VAKLASEGTLRAMGECAAEMCAPYCLPL 1130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,856,729
Number of Sequences: 37544
Number of extensions: 323957
Number of successful extensions: 642
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)