Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F04
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031263-1|AAH31263.1|  252|Homo sapiens similar to CG12314 gene...    69   2e-11
AK090899-1|BAC03541.1|  252|Homo sapiens protein ( Homo sapiens ...    69   3e-11
AL022318-5|CAI17899.1|  386|Homo sapiens protein ( Human DNA seq...    31   5.6  

>BC031263-1|AAH31263.1|  252|Homo sapiens similar to CG12314 gene
           product protein.
          Length = 252

 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 27/85 (31%), Positives = 50/85 (58%)
 Frame = +1

Query: 484 SMDRFLHYLASPKYSLDVCIYVFTNSDIANVLLKLHYKGIKIRIIIDADMAYCTGSNLRR 663
           ++ R L  L + + SLD+C++ F++  + + +  LH +G+++R++ D D     GS +  
Sbjct: 79  ALSRLLRALLAARASLDLCLFAFSSPQLGHAVQLLHQRGVRVRVVTDCDYMALNGSQIGL 138

Query: 664 MERQGIPVRWMKSTNLMHHKFCIID 738
           + + GI VR  +    MHHKF I+D
Sbjct: 139 LRKAGIQVRHDQDPGYMHHKFAIVD 163



 Score = 39.9 bits (89), Expect = 0.012
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = +2

Query: 770 LIAGSLNWTNQALCGNWENVLVTSQADLVNQF 865
           LI GSLNWT QA+  N ENVL+T   + V  F
Sbjct: 167 LITGSLNWTTQAIQNNRENVLITEDDEYVRLF 198


>AK090899-1|BAC03541.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33580 fis, clone BRAMY2011841. ).
          Length = 252

 Score = 68.5 bits (160), Expect = 3e-11
 Identities = 27/85 (31%), Positives = 49/85 (57%)
 Frame = +1

Query: 484 SMDRFLHYLASPKYSLDVCIYVFTNSDIANVLLKLHYKGIKIRIIIDADMAYCTGSNLRR 663
           ++ R L  L + + SLD+C++ F++  +   +  LH +G+++R++ D D     GS +  
Sbjct: 79  ALSRLLRALLAARASLDLCLFAFSSPQLGRAVQLLHQRGVRVRVVTDCDYMALNGSQIGL 138

Query: 664 MERQGIPVRWMKSTNLMHHKFCIID 738
           + + GI VR  +    MHHKF I+D
Sbjct: 139 LRKAGIQVRHDQDPGYMHHKFAIVD 163



 Score = 39.9 bits (89), Expect = 0.012
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = +2

Query: 770 LIAGSLNWTNQALCGNWENVLVTSQADLVNQF 865
           LI GSLNWT QA+  N ENVL+T   + V  F
Sbjct: 167 LITGSLNWTTQAIQNNRENVLITEDDEYVRLF 198


>AL022318-5|CAI17899.1|  386|Homo sapiens protein ( Human DNA
           sequence from clone CTA-150C2 on chromosome
           22q13.1-13.2. ).
          Length = 386

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 541 IYVFTNSDIANVLLKLHYKGIKIRIIIDADMAYC 642
           +Y + + D   VLL+LH  G +++I+   D AYC
Sbjct: 135 LYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYC 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,327,093
Number of Sequences: 237096
Number of extensions: 1834355
Number of successful extensions: 2504
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2504
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)