Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F03
         (918 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    25   1.1  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   2.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   4.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   5.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.8  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   5.8  

>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 355 RXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 498
           R  LGD + K   +  Q+ + +ER  +E  + +P V   + AL E ++
Sbjct: 27  RDVLGDIHAKPTYSDLQNLKYLERCIKESLRLYPSVHLISRALGEDVR 74


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/52 (19%), Positives = 26/52 (50%)
 Frame = +1

Query: 454 PDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYD 609
           PD ++    L + L++      ++ +++ KKV   +    +++  ++ A YD
Sbjct: 53  PDADELKRVLPDALKSDCAKCSEKQKEMTKKVIHFLSHNKQQMWKELTAKYD 104


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 286 KSCASFDLVSELNCCSKVLWNXLGVVFDVLEEVGSVASH 170
           KS A+FD V+  +    +LW       DV+E+  S A +
Sbjct: 418 KSLAAFDFVARNSDTPIILWTSHLTQADVIEKYLSKARY 456


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 133 SLRLHRSGPRSDGATRRS-RLLQGHR 207
           ++RL R+GPR++ A     R++  HR
Sbjct: 179 NIRLKRAGPRTESAVYEPVRIMGVHR 204


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 497 CSFSRRAVAFFSTSGWALRSSSAVRSMFCLDCSK 396
           C    ++ A  ST    LR+ S  +   C+DC+K
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNK 285


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 173 RRDAPDFFKDIEH 211
           RR AP  F+DI+H
Sbjct: 84  RRKAPQSFEDIQH 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,822
Number of Sequences: 336
Number of extensions: 2255
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25651384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)