Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F02
         (809 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    37   0.52 
UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA...    36   1.6  
UniRef50_UPI0000E4931A Cluster: PREDICTED: hypothetical protein;...    35   2.1  
UniRef50_UPI0001556204 Cluster: PREDICTED: hypothetical protein,...    35   2.8  
UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyosteli...    34   3.7  
UniRef50_Q0D8G5 Cluster: Os07g0161900 protein; n=3; Oryza sativa...    34   4.9  
UniRef50_A7RXP7 Cluster: Predicted protein; n=2; cellular organi...    33   8.5  
UniRef50_A2FR65 Cluster: Basic proline-rich protein, putative; n...    33   8.5  
UniRef50_Q8IVW7 Cluster: Glutamate receptor, ionotropic, N-methy...    33   8.5  

>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 159

 Score = 37.1 bits (82), Expect = 0.52
 Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = -1

Query: 776 PPPPPPXXXXX--FFFXXXGGGGGGXKXKXXXGGXXXFXPPXPXXXXXFFFFFXXXLFY 606
           PPPPPP       FFF     GGGG       G    F PP       FFFF    LF+
Sbjct: 67  PPPPPPLKKKKKIFFFFFKKRGGGG-------GFFFFFPPPQQNPPPFFFFFLGFFLFF 118


>UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to CG33556-PA - Strongylocentrotus purpuratus
          Length = 1472

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 21/50 (42%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = -3

Query: 285 PXPXKGGGXPXXPFKSXFFXXGGTQITPXPKGGXPXAPXXKG-GDPRAPG 139
           P P  GG  P  P     F  GG    P P GG P  P   G G PR PG
Sbjct: 481 PPPLPGGAPPPPPPPP--FPGGGVPPPPFPGGGPPPPPPIGGMGVPRLPG 528


>UniRef50_UPI0000E4931A Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 898

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = +1

Query: 682 PPXXXFXFXPPPPPPXXKKKXXXXXXGGGGGG 777
           PP       PPPPPP    K      GGGGGG
Sbjct: 532 PPPPPAPNAPPPPPPPAVNKFTGGGGGGGGGG 563



 Score = 34.3 bits (75), Expect = 3.7
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = +1

Query: 682 PPXXXFXFXPPPPPPXXKKKXXXXXXGGGGGG 777
           PP       PPPPPP   K       GGGGGG
Sbjct: 533 PPPPAPNAPPPPPPPAVNKFTGGGGGGGGGGG 564



 Score = 33.5 bits (73), Expect = 6.4
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -3

Query: 771 PPPPPPXXXXFFFXXGGGGGG 709
           PPPPPP     F   GGGGGG
Sbjct: 541 PPPPPPPAVNKFTGGGGGGGG 561



 Score = 33.5 bits (73), Expect = 6.4
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -3

Query: 771 PPPPPPXXXXFFFXXGGGGGG 709
           PPPPPP    F    GGGGGG
Sbjct: 542 PPPPPPAVNKFTGGGGGGGGG 562


>UniRef50_UPI0001556204 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           hypothetical protein, partial - Ornithorhynchus anatinus
          Length = 291

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = -3

Query: 288 SPXPXKGGGXPXXPFKSXFFXXGGTQITPXPKGGXPXAPXXKGGDPRAP 142
           +P P  GG  P  PF    +  GG+   P P    P      G +P  P
Sbjct: 120 TPSPHVGGSRPVTPFSGKGYLLGGSSGAPRPTSAWPGTGGLGGPEPAGP 168


>UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyostelium
           discoideum|Rep: Actin-binding protein - Dictyostelium
           discoideum AX4
          Length = 1220

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 16/39 (41%), Positives = 16/39 (41%)
 Frame = +1

Query: 661 GGXXXXXPPXXXFXFXPPPPPPXXKKKXXXXXXGGGGGG 777
           GG     PP       PPPPPP   K       GGGG G
Sbjct: 605 GGGPPPPPPPPMMGGGPPPPPPMGGKGGPPPPPGGGGFG 643


>UniRef50_Q0D8G5 Cluster: Os07g0161900 protein; n=3; Oryza
           sativa|Rep: Os07g0161900 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 479

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = +1

Query: 661 GGXXXXXPPXXXFXFXPPPPPPXXK--KKXXXXXXGGGGGG 777
           GG      P       PPPPPP  +  KK      GGGGGG
Sbjct: 20  GGIIRGPRPQPLIVSPPPPPPPASRPPKKPRVVASGGGGGG 60


>UniRef50_A7RXP7 Cluster: Predicted protein; n=2; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 63

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 18/46 (39%), Positives = 19/46 (41%)
 Frame = -3

Query: 279 PXKGGGXPXXPFKSXFFXXGGTQITPXPKGGXPXAPXXKGGDPRAP 142
           P K GG P  P+K      GG    P   GG P  P   GG P  P
Sbjct: 16  PYKDGGHPGLPYKD-----GGHPGLPYKDGGHPGLPYKDGGHPGLP 56


>UniRef50_A2FR65 Cluster: Basic proline-rich protein, putative; n=2;
           Trichomonas vaginalis G3|Rep: Basic proline-rich
           protein, putative - Trichomonas vaginalis G3
          Length = 681

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 18/56 (32%), Positives = 18/56 (32%)
 Frame = +1

Query: 610 KRXXKKKKKKXXXXXGXGGXXXXXPPXXXFXFXPPPPPPXXKKKXXXXXXGGGGGG 777
           K   K    K        G     PP       PPPPPP  K         GGGGG
Sbjct: 214 KPERKAPSPKSSSSSAPSGGAPPPPPPPPSAGAPPPPPPAPKGGKKAAKKSGGGGG 269


>UniRef50_Q8IVW7 Cluster: Glutamate receptor, ionotropic, N-methyl
           D-asparate-associated protein 1; n=26; Euteleostomi|Rep:
           Glutamate receptor, ionotropic, N-methyl
           D-asparate-associated protein 1 - Homo sapiens (Human)
          Length = 371

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -3

Query: 285 PXPXKGGGXPXXPFKSXFFXXGGTQITPXPKGGXPXAPXXKGGDPRAP 142
           P P   GG P  P+       GG    P P+ G P  P  +GG P+ P
Sbjct: 61  PSPYPQGGYPQGPYPQ-----GGYPQGPYPQEGYPQGPYPQGGYPQGP 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,024,572
Number of Sequences: 1657284
Number of extensions: 7338606
Number of successful extensions: 131673
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108267
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)