Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F02
         (809 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC084553-1|AAH84553.1|  371|Homo sapiens glutamate receptor, ion...    33   1.2  
BC041788-1|AAH41788.2|  371|Homo sapiens glutamate receptor, ion...    33   1.2  
AB097026-1|BAC77379.1|  371|Homo sapiens putative MAPK activatin...    33   1.2  
AL138691-1|CAH72340.1|  391|Homo sapiens SRY (sex determining re...    25   5.0  
Y13436-1|CAA73847.1|  387|Homo sapiens Sry-related Box 1 protein...    25   5.0  

>BC084553-1|AAH84553.1|  371|Homo sapiens glutamate receptor,
           ionotropic, N-methyl D-asparate-associated protein 1
           (gluta protein.
          Length = 371

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -3

Query: 285 PXPXKGGGXPXXPFKSXFFXXGGTQITPXPKGGXPXAPXXKGGDPRAP 142
           P P   GG P  P+       GG    P P+ G P  P  +GG P+ P
Sbjct: 61  PSPYPQGGYPQGPYPQ-----GGYPQGPYPQEGYPQGPYPQGGYPQGP 103



 Score = 31.9 bits (69), Expect = 2.8
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -3

Query: 291 FSPXPXKGGGXPXXPFKSXFFXXGGTQITPXPKGGXPXAPXXKGGDPRAP 142
           F P P    G P  P     +  GG    P P+GG P  P  + G P+ P
Sbjct: 47  FQPSPYGQPGYPHGPSP---YPQGGYPQGPYPQGGYPQGPYPQEGYPQGP 93


>BC041788-1|AAH41788.2|  371|Homo sapiens glutamate receptor,
           ionotropic, N-methyl D-asparate-associated protein 1
           (gluta protein.
          Length = 371

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -3

Query: 285 PXPXKGGGXPXXPFKSXFFXXGGTQITPXPKGGXPXAPXXKGGDPRAP 142
           P P   GG P  P+       GG    P P+ G P  P  +GG P+ P
Sbjct: 61  PSPYPQGGYPQGPYPQ-----GGYPQGPYPQEGYPQGPYPQGGYPQGP 103



 Score = 31.9 bits (69), Expect = 2.8
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -3

Query: 291 FSPXPXKGGGXPXXPFKSXFFXXGGTQITPXPKGGXPXAPXXKGGDPRAP 142
           F P P    G P  P     +  GG    P P+GG P  P  + G P+ P
Sbjct: 47  FQPSPYGQPGYPHGPSP---YPQGGYPQGPYPQGGYPQGPYPQEGYPQGP 93


>AB097026-1|BAC77379.1|  371|Homo sapiens putative MAPK activating
           protein protein.
          Length = 371

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -3

Query: 285 PXPXKGGGXPXXPFKSXFFXXGGTQITPXPKGGXPXAPXXKGGDPRAP 142
           P P   GG P  P+       GG    P P+ G P  P  +GG P+ P
Sbjct: 61  PSPYPQGGYPQGPYPQ-----GGYPQGPYPQEGYPQGPYPQGGYPQGP 103



 Score = 31.9 bits (69), Expect = 2.8
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -3

Query: 291 FSPXPXKGGGXPXXPFKSXFFXXGGTQITPXPKGGXPXAPXXKGGDPRAP 142
           F P P    G P  P     +  GG    P P+GG P  P  + G P+ P
Sbjct: 47  FQPSPYGQPGYPHGPSP---YPQGGYPQGPYPQGGYPQGPYPQEGYPQGP 93


>AL138691-1|CAH72340.1|  391|Homo sapiens SRY (sex determining
           region Y)-box 1 protein.
          Length = 391

 Score = 25.0 bits (52), Expect(2) = 5.0
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 528 PXXXGGGGGGGG 493
           P   GGGGGGGG
Sbjct: 25  PAGAGGGGGGGG 36



 Score = 24.6 bits (51), Expect(2) = 5.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 516 GGGGGGGGXXK 484
           GGGGGGGG  K
Sbjct: 35  GGGGGGGGGAK 45


>Y13436-1|CAA73847.1|  387|Homo sapiens Sry-related Box 1 protein
           protein.
          Length = 387

 Score = 25.0 bits (52), Expect(2) = 5.0
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 528 PXXXGGGGGGGG 493
           P   GGGGGGGG
Sbjct: 25  PAGAGGGGGGGG 36



 Score = 24.6 bits (51), Expect(2) = 5.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 516 GGGGGGGGXXK 484
           GGGGGGGG  K
Sbjct: 35  GGGGGGGGGAK 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,447,632
Number of Sequences: 237096
Number of extensions: 1614439
Number of successful extensions: 28929
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24334
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)