Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F01
         (934 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   3.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   7.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   7.9  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = -2

Query: 885 IQNRFVTVQTFHLKFLAFFHPGQAFVNLYRCIESGRVRNNRSPS*EYCMKLHSIY 721
           ++N    +   H  FLA F   +   N   C +  RVR N +   E     ++IY
Sbjct: 186 MKNLICEIDGRHEFFLAEFKSAKTPPNKLNCYDLRRVRKNYNSICELVDAFNNIY 240


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 805 IHKRLAWMKER*EFKMKRLYRHESILDLDPYY 900
           +H   +W+K + EFK + +   E +L  +  Y
Sbjct: 414 LHFHASWLKSKKEFKEELIKFIEEMLQRNDVY 445


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 805 IHKRLAWMKER*EFKMKRLYRHESILDLDPYY 900
           +H   +W+K + EFK + +   E +L  +  Y
Sbjct: 421 LHFHASWLKSKKEFKEELIKFIEEMLQRNDVY 452


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,214
Number of Sequences: 336
Number of extensions: 4498
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)