Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F01
         (934 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766...    33   0.43 
02_01_0142 - 1022387-1022518,1022627-1022671,1022750-1022850,102...    32   0.75 
03_01_0061 + 490037-490045,490121-490302,490551-490671,491933-49...    29   4.0  
03_01_0125 + 977572-977879,978155-978275,979673-979846,979985-98...    29   5.3  
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606...    29   7.0  
02_01_0164 + 1146093-1146119,1146682-1146955,1147309-1147684,114...    29   7.0  
08_01_1056 + 10752363-10752503,10752711-10752771,10753483-107536...    28   9.2  

>07_03_0434 +
           18175560-18175695,18176068-18176177,18176553-18176616,
           18176839-18176915,18177152-18177223,18178337-18178456
          Length = 192

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 414 EERRLFTLKKHLNLYKREHERAMDDIPNYL--GNPINAFTLIKRLTADLDFIEDSIKIGT 587
           +ERRL    K +    +E  RA DD PN++  G  +   T    +T D   + + IK+GT
Sbjct: 18  DERRLLQQNKKI----QEANRAPDDFPNFIREGFEVKVVTSDNYITRDSGLLYEDIKVGT 73


>02_01_0142 -
           1022387-1022518,1022627-1022671,1022750-1022850,
           1023102-1023205,1023352-1023453,1024190-1024404
          Length = 232

 Score = 31.9 bits (69), Expect = 0.75
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 363 LETHKRIIDDLDDYLQKEERRLFTLKKHLNLYKR 464
           L  H R+IDDLDDY+     RL  ++K L +  +
Sbjct: 167 LTLHTRLIDDLDDYVDVTNSRLQRVQKRLAILNK 200


>03_01_0061 +
           490037-490045,490121-490302,490551-490671,491933-492106,
           492246-492409,492506-492593,492687-492740,492837-492917,
           493075-493083
          Length = 293

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 23/67 (34%), Positives = 36/67 (53%)
 Frame = +3

Query: 336 TAITDVEPLLETHKRIIDDLDDYLQKEERRLFTLKKHLNLYKREHERAMDDIPNYLGNPI 515
           TAI ++  L E H R I  L D +   E+R+  + ++L+L   + ++ MD  P +  NP 
Sbjct: 46  TAIREISLLKEMHHRNIVRLHDVIH-SEKRIGLVFEYLDL---DLKKFMDSCPEFAKNP- 100

Query: 516 NAFTLIK 536
              TLIK
Sbjct: 101 ---TLIK 104


>03_01_0125 +
           977572-977879,978155-978275,979673-979846,979985-980148,
           980245-980332,980426-980479,980571-980651,980895-981068
          Length = 387

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 22/67 (32%), Positives = 36/67 (53%)
 Frame = +3

Query: 336 TAITDVEPLLETHKRIIDDLDDYLQKEERRLFTLKKHLNLYKREHERAMDDIPNYLGNPI 515
           TAI ++  L E H   I  L D +   E+R++ + ++L+L   + ++ MD  P +  NP 
Sbjct: 85  TAIREISLLKEMHHGNIVRLHDVIH-SEKRIYLVFEYLDL---DLKKFMDSCPEFAKNP- 139

Query: 516 NAFTLIK 536
              TLIK
Sbjct: 140 ---TLIK 143


>02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,
            6069207-6069291,6069421-6069580,6069667-6069743,
            6069848-6069898,6069979-6070069,6070167-6070468,
            6070549-6070830,6070911-6071388,6071457-6071560,
            6071647-6071809,6071895-6072017,6072099-6072217,
            6072304-6072636,6072713-6073003,6073088-6073171,
            6073260-6073393,6073478-6073705,6073795-6073966,
            6074062-6074316,6074408-6074668
          Length = 1444

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 687  TYYLNVHDLAEGILNGVSYSTPMTASDCYELGRTLYNDKDSQTPG 821
            T+ L V  LA+  + G++++     SD Y+  +TL ++  +  PG
Sbjct: 1111 TWMLEVTTLAQEDILGINFAEVYRNSDLYQRNKTLISELSTPPPG 1155


>02_01_0164 +
           1146093-1146119,1146682-1146955,1147309-1147684,
           1149021-1149239,1149572-1149710,1149844-1150092,
           1150556-1150855
          Length = 527

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 348 DVEPLLETHKRIIDDLDDYLQKEERR 425
           D++ L+E H+ + DD+ + LQ + RR
Sbjct: 7   DIKVLIERHEALTDDVQEMLQHQRRR 32


>08_01_1056 +
           10752363-10752503,10752711-10752771,10753483-10753620,
           10754667-10754883,10755760-10755861,10756030-10756133,
           10756383-10756483,10756563-10756607,10756724-10756855
          Length = 346

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 363 LETHKRIIDDLDDYLQKEERRLFTLKKHLNLYKR 464
           L  H R+IDDL+D++     RL  ++K L +  +
Sbjct: 281 LTLHTRLIDDLEDHVDVTNSRLQRVQKRLAILNK 314


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,508,607
Number of Sequences: 37544
Number of extensions: 418849
Number of successful extensions: 963
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)