Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_E23
         (835 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.8  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   8.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 16/59 (27%), Positives = 17/59 (28%), Gaps = 3/59 (5%)
 Frame = +1

Query: 571 PPPPPXXXXXPPLPP---PPPGXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXPPPPP 738
           PPPPP       +PP   PPP         P                       PPPPP
Sbjct: 531 PPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPP 589



 Score = 24.6 bits (51), Expect = 3.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 577 PPPXXXXXPPLPPPP 621
           PPP     PP+ PPP
Sbjct: 581 PPPAPPPPPPMGPPP 595


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 664 PXXGGXXXXXXXPXXGGGGGG 602
           P  GG       P  GGGGGG
Sbjct: 212 PGGGGGSSGGPGPGGGGGGGG 232



 Score = 24.2 bits (50), Expect = 5.0
 Identities = 11/31 (35%), Positives = 11/31 (35%)
 Frame = -2

Query: 663 PXXGXXXXXXXXPXXGGGEGGXXXXXXGGGG 571
           P  G        P  GGG  G      GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 571 PPPPPXXXXXPPLPPPP 621
           PPP       PP+ PPP
Sbjct: 629 PPPSAYQQQQPPVVPPP 645


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,352
Number of Sequences: 2352
Number of extensions: 9220
Number of successful extensions: 48
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)