Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_E22
         (999 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma j...    40   0.100
UniRef50_Q5BXW2 Cluster: SJCHGC01957 protein; n=3; Eukaryota|Rep...    39   0.23 
UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    37   0.93 
UniRef50_Q5C113 Cluster: SJCHGC03128 protein; n=4; Eukaryota|Rep...    36   1.2  
UniRef50_Q9FXE0 Cluster: F12A21.10; n=1; Arabidopsis thaliana|Re...    35   2.8  
UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1; ...    35   3.8  
UniRef50_Q0S917 Cluster: Possible proline rich protein; n=1; Rho...    34   5.0  
UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.7  
UniRef50_A4HCA2 Cluster: Rer1 family-like protein; n=1; Leishman...    33   8.7  

>UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC03138 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 156

 Score = 39.9 bits (89), Expect = 0.100
 Identities = 20/40 (50%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
 Frame = +2

Query: 482 FFFFXXXPPXGGXX------PPPPLFFXXKKXXXPPPPXG 583
           FFF    PP GG        PPPP FF  KK   PPPP G
Sbjct: 15  FFFRGVFPPRGGPLFFYGAPPPPPPFFFNKKKRPPPPPGG 54



 Score = 33.9 bits (74), Expect = 6.6
 Identities = 17/36 (47%), Positives = 17/36 (47%)
 Frame = -3

Query: 619 PPPPQKKXXXXPPPGGGGXXXFFXXKKKGGGGXXPP 512
           PPPP       PP GGGG   FF      GGG  PP
Sbjct: 48  PPPPP--GGPPPPFGGGGFPPFFHFFPPPGGGVAPP 81


>UniRef50_Q5BXW2 Cluster: SJCHGC01957 protein; n=3; Eukaryota|Rep:
           SJCHGC01957 protein - Schistosoma japonicum (Blood
           fluke)
          Length = 180

 Score = 38.7 bits (86), Expect = 0.23
 Identities = 17/29 (58%), Positives = 17/29 (58%)
 Frame = -1

Query: 909 FFFFFFFFXXXPXGGGGGGXXXXXPXXKK 823
           FFFFFFFF     GGGGGG     P  KK
Sbjct: 30  FFFFFFFFFFFFLGGGGGGPPFFAPPKKK 58


>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 36.7 bits (81), Expect = 0.93
 Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
 Frame = -3

Query: 619 PPPPQKKXXXX--------PPPGGGGXXXFFXXKKKGGGGXXPPXXXXXXKKKKXFFFXX 464
           PPPP ++            PPP  GG   FF  KK+GG     P      +KKK FFF  
Sbjct: 47  PPPPARRQKFFFFPHFFFPPPPRRGGGGVFFYKKKRGG-----PPPPPTTQKKKNFFFSP 101

Query: 463 XP 458
            P
Sbjct: 102 PP 103



 Score = 36.3 bits (80), Expect = 1.2
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
 Frame = -3

Query: 619 PPPPQKKXXXXPPPGGGG-----XXXFFXXKKKGGGGXXPPXXXXXXKKKKXFFF 470
           PPPP KK       GGGG        F    ++GGGG  PP      +++K FFF
Sbjct: 8   PPPPPKKKKKKKGRGGGGAHPHLFFFFLGGGREGGGGAPPP---PPARRQKFFFF 59


>UniRef50_Q5C113 Cluster: SJCHGC03128 protein; n=4; Eukaryota|Rep:
           SJCHGC03128 protein - Schistosoma japonicum (Blood
           fluke)
          Length = 145

 Score = 36.3 bits (80), Expect = 1.2
 Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
 Frame = -3

Query: 619 PPPPQKKXXXXPPPGGGGXXXFFXXKKKGGGG-----XXPPXXXXXXKKKK 482
           PPPP  K    PP GGGG   F   K +GGGG       PP       KKK
Sbjct: 94  PPPP--KGGGGPPGGGGGLSFFKKKKGRGGGGAQKKKRGPPPGGKTPPKKK 142


>UniRef50_Q9FXE0 Cluster: F12A21.10; n=1; Arabidopsis thaliana|Rep:
           F12A21.10 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 527

 Score = 35.1 bits (77), Expect = 2.8
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +2

Query: 488 FFXXXPPXGGXXPPPPLFFXXKKXXXPPPP 577
           FF   PP     PPPPL+F       PPPP
Sbjct: 39  FFLPHPPPPPPPPPPPLYFSYFSLPPPPPP 68


>UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 272

 Score = 34.7 bits (76), Expect = 3.8
 Identities = 21/68 (30%), Positives = 22/68 (32%)
 Frame = -1

Query: 867 GGGGGXXXXXPXXKKXXXXXXXXXXPPPPXXXXXXXXXXXXXXKKKKKKXPPPXXXXXXX 688
           GGGGG        KK           P P              KKKKK+ PPP       
Sbjct: 197 GGGGGGAPPPQKKKKKKKKIFSFSLFPTPRKKKTYFYFFFLFLKKKKKQRPPPSYPLKKE 256

Query: 687 XXXXGGGG 664
               GGGG
Sbjct: 257 KNKRGGGG 264



 Score = 33.5 bits (73), Expect = 8.7
 Identities = 20/69 (28%), Positives = 22/69 (31%)
 Frame = -1

Query: 870 GGGGGGXXXXXPXXKKXXXXXXXXXXPPPPXXXXXXXXXXXXXXKKKKKKXPPPXXXXXX 691
           GGGGGG        KK          P P               KKKK++ PP       
Sbjct: 197 GGGGGGAPPPQKKKKKKKKIFSFSLFPTPRKKKTYFYFFFLFLKKKKKQRPPPSYPLKKE 256

Query: 690 XXXXXGGGG 664
                GGGG
Sbjct: 257 KNKRGGGGG 265


>UniRef50_Q0S917 Cluster: Possible proline rich protein; n=1;
           Rhodococcus sp. RHA1|Rep: Possible proline rich protein
           - Rhodococcus sp. (strain RHA1)
          Length = 338

 Score = 34.3 bits (75), Expect = 5.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 503 PPXGGXXPPPPLFFXXKKXXXPPPPXG 583
           PP GG  PPPP  +   +   PPPP G
Sbjct: 79  PPSGGNYPPPPGNYPPPQGNYPPPPQG 105


>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 159

 Score = 33.5 bits (73), Expect = 8.7
 Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -3

Query: 616 PPPQKKXXXXPPPGGGGXXXFFXX--KKKGGGGXXPPXXXXXXKKKKXFF 473
           PPPQ+     PPP       FF    KK+GGGG  PP      KKKK FF
Sbjct: 98  PPPQQN----PPPFFFFFLGFFLFFFKKRGGGGFSPP----PPKKKKIFF 139


>UniRef50_A4HCA2 Cluster: Rer1 family-like protein; n=1; Leishmania
           braziliensis|Rep: Rer1 family-like protein - Leishmania
           braziliensis
          Length = 116

 Score = 33.5 bits (73), Expect = 8.7
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 473 KKXFFFFXXXPPXGGXXPPPPLFF 544
           +K FFF    PP  G  PPPP FF
Sbjct: 93  EKVFFFSAPPPPGPGGGPPPPFFF 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,656,632
Number of Sequences: 1657284
Number of extensions: 10161093
Number of successful extensions: 96564
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62772
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 94306056537
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)