Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_E22
(999 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.3
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.3
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 30 2.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 3.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 3.0
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 30 3.0
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 30 3.0
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 30 3.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 3.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 3.9
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 3.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 9.1
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 622 APPPPQKKXXXXPPPGGGGXXXFFXXKKKGGGGXXP 515
APPPP + P GGGG + G GG P
Sbjct: 789 APPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 622 APPPPQKKXXXXPPPGGGGXXXFFXXKKKGGGGXXP 515
APPPP + P GGGG + G GG P
Sbjct: 789 APPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 503 PPXGGXXPPPPLFFXXKKXXXPPPPXG 583
P GG PPPP F PPPP G
Sbjct: 42 PCGGGFGPPPPPFGPVGYALPPPPPNG 68
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 503 PPXGGXXPPPPLFFXXKKXXXPPPPXGG 586
PP G PPPP PPPP GG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 503 PPXGGXXPPPPLFFXXKKXXXPPPPXGG 586
PP G PPPP PPPP GG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical protein
F13B9.1c protein.
Length = 1609
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 622 APPPPQKKXXXXPPPGGGG 566
APPPP + PP GGGG
Sbjct: 1520 APPPPMAQAGPAPPVGGGG 1538
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical protein
F13B9.1b protein.
Length = 1614
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 622 APPPPQKKXXXXPPPGGGG 566
APPPP + PP GGGG
Sbjct: 1520 APPPPMAQAGPAPPVGGGG 1538
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical protein
F13B9.1a protein.
Length = 1632
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 622 APPPPQKKXXXXPPPGGGG 566
APPPP + PP GGGG
Sbjct: 1542 APPPPMAQAGPAPPVGGGG 1560
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 503 PPXGGXXPPPPLFFXXKKXXXPPPPXGG 586
PP G PPPP PPPP GG
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGG 362
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 488 FFXXXPPXGGXXPPPPLFFXXKKXXXPPPPXGG 586
F P GG PPPP+F PPP GG
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGG--IPPPPPMMGG 103
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 503 PPXGGXXPPPPLFFXXKKXXXPPPPXG 583
PP G PPPP F PPPP G
Sbjct: 98 PPMMGGIPPPPPMFG--APPPPPPPSG 122
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/79 (26%), Positives = 21/79 (26%), Gaps = 2/79 (2%)
Frame = +2
Query: 485 FFFXXXPPXGGXXPPPPLFF--XXKKXXXPPPPXGGXXXXXXXXXXXXXXXXXXXXXKKK 658
F F PP G PPPP F PPPP G
Sbjct: 293 FGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPF 352
Query: 659 XXPPPPXXXXXXXXXXXGG 715
PPPP GG
Sbjct: 353 FPPPPPHFMRPSSPPTDGG 371
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/79 (26%), Positives = 21/79 (26%), Gaps = 2/79 (2%)
Frame = +2
Query: 485 FFFXXXPPXGGXXPPPPLFF--XXKKXXXPPPPXGGXXXXXXXXXXXXXXXXXXXXXKKK 658
F F PP G PPPP F PPPP G
Sbjct: 293 FGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPF 352
Query: 659 XXPPPPXXXXXXXXXXXGG 715
PPPP GG
Sbjct: 353 FPPPPPHFMRPSSPPTDGG 371
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +2
Query: 503 PPXG--GXXPPPPLFFXXKKXXXPPPPXG 583
PP G PPPP+F PPPP G
Sbjct: 733 PPMGFDPNKPPPPMFQQGFNAGAPPPPFG 761
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,596,446
Number of Sequences: 27780
Number of extensions: 263214
Number of successful extensions: 3036
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1949
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2615559500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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