Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_E18
(1013 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 27 0.27
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.3
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 27.1 bits (57), Expect = 0.27
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 617 PPPPPPPPA 591
PPPPPPPP+
Sbjct: 1355 PPPPPPPPS 1363
Score = 26.6 bits (56), Expect = 0.36
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 780 PPPPPPPP 757
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 26.6 bits (56), Expect = 0.36
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 779 PPPPPPPP 756
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 26.6 bits (56), Expect = 0.36
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 548 PPPPPPPP 525
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 26.6 bits (56), Expect = 0.36
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 543 PPPPPPPP 520
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 26.6 bits (56), Expect = 0.36
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 942 PPPPPPPP 965
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 26.6 bits (56), Expect = 0.36
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 945 PPPPPPPP 968
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 26.6 bits (56), Expect = 0.36
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 946 PPPPPPPP 969
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 781 PPPPPPPPXXXXP 743
P PPPPPP P
Sbjct: 341 PAPPPPPPSSSGP 353
Score = 23.8 bits (49), Expect = 2.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 617 PPPPPPPPA 591
P PPPPPP+
Sbjct: 341 PAPPPPPPS 349
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 547 PPPPPPPP 524
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 545 PPPPPPPP 522
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 942 PPPPPPPP 965
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 945 PPPPPPPP 968
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 946 PPPPPPPP 969
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.0 bits (47), Expect = 4.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 782 PPPPPPPPP 756
PP P PPPP
Sbjct: 338 PPKPAPPPP 346
Score = 23.0 bits (47), Expect = 4.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 548 PPPPPPPPP 522
PP P PPPP
Sbjct: 338 PPKPAPPPP 346
Score = 23.0 bits (47), Expect = 4.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 942 PPPPPPPPP 968
PP P PPPP
Sbjct: 338 PPKPAPPPP 346
Score = 23.0 bits (47), Expect = 4.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 943 PPPPPPPPP 969
PP P PPPP
Sbjct: 338 PPKPAPPPP 346
Score = 23.0 bits (47), Expect = 4.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 782 PPPPPPPPP 756
P P PPPPP
Sbjct: 339 PKPAPPPPP 347
Score = 23.0 bits (47), Expect = 4.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 548 PPPPPPPPP 522
P P PPPPP
Sbjct: 339 PKPAPPPPP 347
Score = 23.0 bits (47), Expect = 4.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 942 PPPPPPPPP 968
P P PPPPP
Sbjct: 339 PKPAPPPPP 347
Score = 23.0 bits (47), Expect = 4.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 943 PPPPPPPPP 969
P P PPPPP
Sbjct: 339 PKPAPPPPP 347
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 780 PPPPPPPP 757
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 779 PPPPPPPP 756
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 617 PPPPPPPP 594
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 546 PPPPPPPP 523
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 545 PPPPPPPP 522
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 942 PPPPPPPP 965
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 945 PPPPPPPP 968
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 946 PPPPPPPP 969
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.162 0.569
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,575
Number of Sequences: 438
Number of extensions: 10037
Number of successful extensions: 140
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33741981
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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