Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_E15
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006679-7|AAK84463.1|  531|Caenorhabditis elegans Lipid deplete...   168   4e-42
Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical p...    34   0.16 
Z77663-4|CAB01213.1|  605|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z72512-8|CAH04717.1|  583|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z72512-7|CAA96668.3|  568|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U23511-5|AAC46794.1|  578|Caenorhabditis elegans Hypothetical pr...    29   6.0  

>AC006679-7|AAK84463.1|  531|Caenorhabditis elegans Lipid depleted
           protein 7 protein.
          Length = 531

 Score =  168 bits (409), Expect = 4e-42
 Identities = 78/195 (40%), Positives = 113/195 (57%)
 Frame = +3

Query: 198 YSSGEGAQFMTRXXXXXXXXXXXXDFRRICILKGIYPREPRNRKRAQKGAGGIKTLYHTK 377
           Y++G    +M+R            DFRR+CI+KGIYP EP ++K+A KG+   K  Y+ K
Sbjct: 9   YTAGAAVAYMSRKQALKKLQLTLKDFRRLCIIKGIYPHEPAHKKQANKGSTANKVFYYRK 68

Query: 378 DIKFLLHEPIIWKLRELKVYQQKIRRARAQREYGKMRKFLRDYPEINIDHIVKERYPTFV 557
           DI FL HEPII K R+ KV+ +K+   +A++E  K++K   + P  ++D IVKER+PTF 
Sbjct: 69  DINFLAHEPIINKFRDYKVFLRKLNHLKAKKEEDKLKKLYENKPVYSLDTIVKERFPTFG 128

Query: 558 XXXXXXXXXXXXXXXXSTFPSLKKVPRDQSFLCRRLTVEFMHAVIAAKALRKVFVSVKGF 737
                           +  P  + +       CR+LT EFMH VI +++LR  F+S+KG 
Sbjct: 129 SALRDMDDALSLCFTFAMLPHTRVLKEGMIDSCRKLTAEFMHYVIESQSLRNTFISIKGI 188

Query: 738 YYQVEFEGQTITWIV 782
           YYQ E  G+ ITW+V
Sbjct: 189 YYQAEVHGEKITWVV 203


>Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical
           protein F11A5.15 protein.
          Length = 191

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = -1

Query: 560 VNKRGVSFLYYVINVYFWIVPQKLSHLAIFSLCSCTTNFLL 438
           ++KR   ++  + N++F+I+P  L  + I+ L SC +N LL
Sbjct: 7   ISKRKSIYILIISNIFFFIIPLYLIVIGIWKLTSCPSNQLL 47


>Z77663-4|CAB01213.1|  605|Caenorhabditis elegans Hypothetical
           protein F53F4.4 protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +2

Query: 152 LNKDNNHN--GVQKEEEVFFRRRSSVYDQKSSA*ETTTILERFQTYLYFERNIPPRT*KP 325
           LN D+ +   GV KEEEV     S+   +  S   T+ +LE   T  + E  I  ++ + 
Sbjct: 177 LNVDDKNTTLGVSKEEEVIATTESTKEKKLKSGEVTSHVLESTTTVEFLENKISEKSNEI 236

Query: 326 KEGS 337
            EGS
Sbjct: 237 VEGS 240


>Z72512-8|CAH04717.1|  583|Caenorhabditis elegans Hypothetical
           protein R07B5.8b protein.
          Length = 583

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 308 PRT*KPKEGSKRCRRNQNTLSH*RYKIFTTRANNMETEGTKGLSTKNSSC 457
           PRT +P+   +  RR  + LS     I T R+N++  +G+   S+  +SC
Sbjct: 13  PRTPRPRYSPEAQRRTNSRLS--ALTIDTNRSNDLNVDGSAPSSSSAASC 60


>Z72512-7|CAA96668.3|  568|Caenorhabditis elegans Hypothetical
           protein R07B5.8a protein.
          Length = 568

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 308 PRT*KPKEGSKRCRRNQNTLSH*RYKIFTTRANNMETEGTKGLSTKNSSC 457
           PRT +P+   +  RR  + LS     I T R+N++  +G+   S+  +SC
Sbjct: 58  PRTPRPRYSPEAQRRTNSRLS--ALTIDTNRSNDLNVDGSAPSSSSAASC 105


>U23511-5|AAC46794.1|  578|Caenorhabditis elegans Hypothetical
           protein C32D5.6 protein.
          Length = 578

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 339 KGAGGIKTLYHT-KDIKFLLHEPIIWKLRELKVYQQ 443
           KGA  I+T Y T +  + L++EP +W  R  KV +Q
Sbjct: 164 KGALNIRTCYQTYRYCEKLMNEPSVWVGRNKKVQEQ 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,532,790
Number of Sequences: 27780
Number of extensions: 445720
Number of successful extensions: 990
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)