Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_E14
         (816 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888     29   3.3  
04_03_0799 - 19805190-19805749,19806316-19806403                       29   3.3  
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093...    28   7.7  

>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
          Length = 213

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 326 PPPXLXXPXXXPXFFFXPPPXGGXK 400
           PPP    P     +++ PPP GG K
Sbjct: 176 PPPPAIWPPQPSFYYYPPPPCGGYK 200


>04_03_0799 - 19805190-19805749,19806316-19806403
          Length = 215

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 326 PPPXLXXPXXXPXFFFXPPPXGGXK 400
           PPP    P     +++ PPP GG K
Sbjct: 178 PPPAAIWPPQPSFYYYPPPPCGGYK 202


>01_06_1670 -
           39007402-39008229,39008320-39008567,39009159-39009364,
           39009454-39011054
          Length = 960

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 501 PPPPPXXPXXXXXPPXXKKXP 439
           PPPPP  P     PP  +K P
Sbjct: 358 PPPPPFAPTLPPPPPPRRKPP 378


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,004,795
Number of Sequences: 37544
Number of extensions: 211166
Number of successful extensions: 1789
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)