Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_E12
(908 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 214 8e-56
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 214 8e-56
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 212 3e-55
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 212 3e-55
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 191 5e-49
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 191 5e-49
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 29 4.6
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 29 4.6
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 214 bits (522), Expect = 8e-56
Identities = 91/159 (57%), Positives = 121/159 (76%), Gaps = 2/159 (1%)
Frame = +3
Query: 255 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 428
V ++K P+K IVWRNV LF LHV G Y +F A W+T++F+ LY+ SG GIT
Sbjct: 33 VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92
Query: 429 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 608
AGAHRLW+HKSYKA P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93 AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152
Query: 609 FFFSHIGWLLLRKHPEIKAKGHTVDVNDLHNDPILRFQK 725
FFF+H+GWLL+RKHP++K G +D++DL +DP+L FQ+
Sbjct: 153 FFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQR 191
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 214 bits (522), Expect = 8e-56
Identities = 91/159 (57%), Positives = 121/159 (76%), Gaps = 2/159 (1%)
Frame = +3
Query: 255 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 428
V ++K P+K IVWRNV LF LHV G Y +F A W+T++F+ LY+ SG GIT
Sbjct: 33 VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92
Query: 429 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 608
AGAHRLW+HKSYKA P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93 AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152
Query: 609 FFFSHIGWLLLRKHPEIKAKGHTVDVNDLHNDPILRFQK 725
FFF+H+GWLL+RKHP++K G +D++DL +DP+L FQ+
Sbjct: 153 FFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQR 191
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 212 bits (517), Expect = 3e-55
Identities = 91/155 (58%), Positives = 118/155 (76%), Gaps = 2/155 (1%)
Frame = +3
Query: 267 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 440
++K P+K IVWRNV LF LH G Y +F+A W+T IF LY+ G GITAGAH
Sbjct: 38 SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97
Query: 441 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 620
RLW+HKSYKA P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98 RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157
Query: 621 HIGWLLLRKHPEIKAKGHTVDVNDLHNDPILRFQK 725
H+GWLL+RKHP++K +G +D++DL +DP+L FQ+
Sbjct: 158 HMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQR 192
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 212 bits (517), Expect = 3e-55
Identities = 91/155 (58%), Positives = 118/155 (76%), Gaps = 2/155 (1%)
Frame = +3
Query: 267 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 440
++K P+K IVWRNV LF LH G Y +F+A W+T IF LY+ G GITAGAH
Sbjct: 38 SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97
Query: 441 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 620
RLW+HKSYKA P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98 RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157
Query: 621 HIGWLLLRKHPEIKAKGHTVDVNDLHNDPILRFQK 725
H+GWLL+RKHP++K +G +D++DL +DP+L FQ+
Sbjct: 158 HMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQR 192
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 191 bits (466), Expect = 5e-49
Identities = 75/147 (51%), Positives = 110/147 (74%)
Frame = +3
Query: 285 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 464
+IVW+NV LF LH+G + G Y +F+A W T + L+ +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 465 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 644
KA L R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+ RG FF+H+GWLL++
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156
Query: 645 KHPEIKAKGHTVDVNDLHNDPILRFQK 725
KH ++K +G +D++DL+ DP+L FQ+
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLMFQR 183
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 191 bits (466), Expect = 5e-49
Identities = 75/147 (51%), Positives = 110/147 (74%)
Frame = +3
Query: 285 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 464
+IVW+NV LF LH+G + G Y +F+A W T + L+ +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 465 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 644
KA L R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+ RG FF+H+GWLL++
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156
Query: 645 KHPEIKAKGHTVDVNDLHNDPILRFQK 725
KH ++K +G +D++DL+ DP+L FQ+
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLMFQR 183
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 171 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 281
+PP +A + + +P +PPH PPS E P
Sbjct: 66 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 102
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 171 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 281
+PP +A + + +P +PPH PPS E P
Sbjct: 72 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,270,589
Number of Sequences: 27780
Number of extensions: 471526
Number of successful extensions: 1425
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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