Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_E11
(949 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 38 0.015
01_06_0824 - 32243495-32244319,32244449-32244859 36 0.062
11_01_0767 + 6438648-6438809,6439146-6440000 33 0.25
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 31 1.3
01_01_1152 + 9170628-9171899 30 2.3
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 4.1
11_01_0750 - 6315126-6315896,6316371-6316784 29 5.4
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 7.1
11_02_0014 - 7352619-7352918,7353173-7353418 29 7.1
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 28 9.4
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 28 9.4
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 37.5 bits (83), Expect = 0.015
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYKYGESAALNXQLIEI 809
VL NA+ FKG KFD D +F++ +++ P M R K S+ + +++++
Sbjct: 497 VLANALYFKGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTR--KKQYLSSYDSLKVLKL 554
Query: 810 PY--KGD--QSSLIVVLPKTR 860
PY GD Q S+ ++LP+ +
Sbjct: 555 PYLQGGDKRQFSMYILLPEAQ 575
Score = 35.9 bits (79), Expect = 0.047
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYKYGESAALNXQLIEI 809
VL NA+ FKG KFD D +F++ +++ P M +Y S N +++++
Sbjct: 245 VLGNALYFKGAWTEKFDASKTKDGEFHLLDGKSVQAPFM-STSKKQYILSYD-NLKVLKL 302
Query: 810 PYK--GD--QSSLIVVLPKTR 860
PY+ GD Q S+ ++LP+ +
Sbjct: 303 PYQQGGDKRQFSMYILLPEAQ 323
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 521 KNTVAAKSINEWVEKNTNNRIKXLVNPESLNSTTGGCSRQRHLXQGTWS 667
K A +N WVEK T+ IK ++ P S++ TT +G W+
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWT 257
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 545 INEWVEKNTNNRIKXLVNPESLNSTTGGCSRQRHLXQGTWS 667
+N WV++ T+ IK + P S+N T +G W+
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWA 509
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 35.5 bits (78), Expect = 0.062
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +2
Query: 401 GVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDF-SKNTVAAKSINEWVEKNTNN 577
G +++ AN V+V +L +A V + + F K A + INEW E T
Sbjct: 96 GPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAG 155
Query: 578 RIKXLVNPESLNSTTGGCSRQRHLXQGTWSS 670
RIK + ++++ T +G W S
Sbjct: 156 RIKDFLPKDAVDRATPAVLGNALYFKGDWES 186
Score = 34.7 bits (76), Expect = 0.11
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYKYGESAALNXQLIEI 809
VL NA+ FKG KFD R D FY+ + P M G ++Y A +++ +
Sbjct: 173 VLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFM-SSGKWQYIACRA-GYKVLRL 230
Query: 810 PY 815
PY
Sbjct: 231 PY 232
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 33.5 bits (73), Expect = 0.25
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 509 IDFSKNTVAA-KSINEWVEKNTNNRIKXLVNPESLNSTTGGCSRQRHLXQGTW 664
+DF + V A K IN WV + T N I ++ PES + T +G W
Sbjct: 49 VDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Score = 32.3 bits (70), Expect = 0.58
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYKYGESAALNXQLIEI 809
V+ NAI FKG + FD +R+F +++VP M + + + +++ +
Sbjct: 90 VVGNAIYFKGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRL 149
Query: 810 PYK 818
PYK
Sbjct: 150 PYK 152
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYKYGESAALNXQLIEI 809
VL NA+ FKG KFD D +F + ++ P M K S+ + +++++
Sbjct: 37 VLGNALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFM--STSKKQYLSSYDSLKVLKL 94
Query: 810 PY-KG---DQSSLIVVLPKTR 860
PY KG Q S+ ++LP+ +
Sbjct: 95 PYQKGRDLRQFSMYILLPEAQ 115
>01_01_1152 + 9170628-9171899
Length = 423
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYKYGESAALNXQLIEI 809
VL NA+ FKG L F F++ ++ P M ++ +A +++
Sbjct: 191 VLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFERHVAAFPGFTALKL 250
Query: 810 PYK 818
PYK
Sbjct: 251 PYK 253
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +2
Query: 341 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 466
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 615 QPQGGVLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYKYGESAAL-- 788
Q G VL +A+ F+G + + D R ++ FY +++VP + +Y A+
Sbjct: 169 QNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFV----EYDRTRLFAVHD 224
Query: 789 NXQLIEIPYK 818
N ++I++PYK
Sbjct: 225 NFKVIKLPYK 234
Score = 28.3 bits (60), Expect = 9.4
Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
Frame = +2
Query: 380 RDLRSIKGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDF-SKNTVAAKSINEW 556
RD + G L A V+ L F + DF +K A IN W
Sbjct: 90 RDRSTSGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSW 149
Query: 557 VEKNTNNRIKXLVNPESLNSTTGGCSRQRHLXQGTW 664
V+ +T + L+ +++ TG +G W
Sbjct: 150 VKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRW 185
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 359 TEFASKSRDLRSIKGVELKMANKVYVHDG 445
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYKYGESAALNXQLIEI 809
VLVNAI FKG F F+ ++ V M R D G N ++++
Sbjct: 118 VLVNAIYFKGKWSDPFPRESTTTGKFHRLDGSSVNVRFMRSREDQYIGFYDGFN--VLKL 175
Query: 810 PYKG 821
PY G
Sbjct: 176 PYNG 179
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 399 LIDRRSRLLLANSVRIASSSGK 334
LIDRR RLL NS A++SGK
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGK 664
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 424 VRHFKLNAFN*SKVTAFTREFCSYSIVVREADSFSKALHG 305
VRH ++ +N + + FC+Y+I + D SK G
Sbjct: 130 VRHREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARG 169
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,682,574
Number of Sequences: 37544
Number of extensions: 374464
Number of successful extensions: 824
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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