Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_E11
(949 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 55 9e-08
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 55 9e-08
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 55 9e-08
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 55 9e-08
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 55 9e-08
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 55 9e-08
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 50 3e-06
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 50 3e-06
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 44 2e-04
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 44 2e-04
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 42 9e-04
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 42 9e-04
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 42 9e-04
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 42 9e-04
Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical pr... 33 0.39
AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein. 33 0.39
AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein. 33 0.39
Z93377-7|CAB07571.2| 197|Caenorhabditis elegans Hypothetical pr... 31 1.6
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 29 3.7
AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p4... 29 3.7
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 3.7
AF039050-5|AAC47938.1| 499|Caenorhabditis elegans Cytochrome p4... 29 4.9
Z81047-1|CAB02827.1| 490|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF022978-2|AAG24183.1| 440|Caenorhabditis elegans Nuclear hormo... 29 6.4
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 54.8 bits (126), Expect = 9e-08
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +2
Query: 344 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFS 520
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + G ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 521 KNTVAAKSINEWVEKNTNNRIKXLVNPESLNS 616
A++IN +V +NT + IK ++ +S+NS
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYK-YGESAALNXQLIE 806
VL NA+ FK KF +F+ S D ++ ++ + Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 807 IPYKGDQSSLIVVLPKTRMAYXTSRSXKDLRSWKRVTKHV 926
+PYK + +L + LPKTR S D + + + +V
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLSNV 254
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 54.8 bits (126), Expect = 9e-08
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +2
Query: 344 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFS 520
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + G ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 521 KNTVAAKSINEWVEKNTNNRIKXLVNPESLNS 616
A++IN +V +NT + IK ++ +S+NS
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYK-YGESAALNXQLIE 806
VL NA+ FK KF +F+ S D ++ ++ + Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 807 IPYKGDQSSLIVVLPKTRMAYXTSRSXKDLRSWKRVTKHV 926
+PYK + +L + LPKTR S D + + + +V
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLSNV 254
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 54.8 bits (126), Expect = 9e-08
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +2
Query: 344 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFS 520
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + G ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 521 KNTVAAKSINEWVEKNTNNRIKXLVNPESLNS 616
A++IN +V +NT + IK ++ +S+NS
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYK-YGESAALNXQLIE 806
VL NA+ FK KF +F+ S D ++ ++ + Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 807 IPYKGDQSSLIVVLPKTRMAYXTSRSXKDLRSWKRVTKHV 926
+PYK + +L + LPKTR S D + + + +V
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLSNV 254
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 54.8 bits (126), Expect = 9e-08
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +2
Query: 344 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFS 520
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + G ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 521 KNTVAAKSINEWVEKNTNNRIKXLVNPESLNS 616
A++IN +V +NT + IK ++ +S+NS
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYK-YGESAALNXQLIE 806
VL NA+ FK KF +F+ S D ++ ++ + Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 807 IPYKGDQSSLIVVLPKTRMAYXTSRSXKDLRSWKRVTKHV 926
+PYK + +L + LPKTR S D + + + +V
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLSNV 254
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 54.8 bits (126), Expect = 9e-08
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +2
Query: 344 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFS 520
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + G ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 521 KNTVAAKSINEWVEKNTNNRIKXLVNPESLNS 616
A++IN +V +NT + IK ++ +S+NS
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYK-YGESAALNXQLIE 806
VL NA+ FK KF +F+ S D ++ ++ + Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 807 IPYKGDQSSLIVVLPKTRMAYXTSRSXKDLRSWKRVTKHV 926
+PYK + +L + LPKTR S D + + + +V
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLSNV 254
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 54.8 bits (126), Expect = 9e-08
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +2
Query: 344 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFS 520
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + G ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 521 KNTVAAKSINEWVEKNTNNRIKXLVNPESLNS 616
A++IN +V +NT + IK ++ +S+NS
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYK-YGESAALNXQLIE 806
VL NA+ FK KF +F+ S D ++ ++ + Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 807 IPYKGDQSSLIVVLPKTRMAYXTSRSXKDLRSWKRVTKHV 926
+PYK + +L + LPKTR S D + + + +V
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLSNV 254
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/72 (31%), Positives = 42/72 (58%)
Frame = +2
Query: 401 GVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFSKNTVAAKSINEWVEKNTNNR 580
GVE K+ N+V+V+ + +++ ++DFS+ AAK++N +VE +TN +
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 581 IKXLVNPESLNS 616
IK L+ +S N+
Sbjct: 137 IKDLIPADSANN 148
Score = 35.1 bits (77), Expect = 0.074
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 633 LVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYK-YGESAALNXQLIEI 809
LVNA+ FK KF R+F+ S+ + ++P + +++ Y E Q++ +
Sbjct: 153 LVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTDVDEHRDYTEDVLF--QVLSL 210
Query: 810 PYKGDQSSLIVVLPKTR 860
Y + +L + LPK R
Sbjct: 211 KYADPKFTLAIFLPKQR 227
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/72 (31%), Positives = 42/72 (58%)
Frame = +2
Query: 401 GVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFSKNTVAAKSINEWVEKNTNNR 580
GVE K+ N+V+V+ + +++ ++DFS+ AAK++N +VE +TN +
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 581 IKXLVNPESLNS 616
IK L+ +S N+
Sbjct: 137 IKDLIPADSANN 148
Score = 36.3 bits (80), Expect = 0.032
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 633 LVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRGDYK-YGESAALNXQLIEI 809
LVNA+ FK KF R+F+ S+ + ++P + + +++ Y E Q++ +
Sbjct: 153 LVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTELDEHRDYTEDVLF--QVLSL 210
Query: 810 PYKGDQSSLIVVLPKTR 860
Y + +L + LPK R
Sbjct: 211 KYADPKFTLAIFLPKQR 227
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRG-DYKYGESAALNXQLIE 806
VL NA FK KF R+F+ S++ + ++ R + KY E+ Q++
Sbjct: 166 VLTNAFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENGQF--QVLS 223
Query: 807 IPYKGDQSSLIVVLPKTR 860
+PYK +L + LPKTR
Sbjct: 224 LPYKDTSFALSIFLPKTR 241
Score = 42.7 bits (96), Expect = 4e-04
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +2
Query: 344 DDAIRTEFASKSRDLR-SIKGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFS 520
D+ + F++ S L + KG E+ +AN ++ + + + + G ++F
Sbjct: 70 DEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFE 129
Query: 521 KNTVAAKSINEWVEKNTNNRIKXLVNPESLN 613
+A++IN +V +NT IK ++NP+S++
Sbjct: 130 DQEASAEAINNFVSENTKGHIKKIINPDSIS 160
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYKRG-DYKYGESAALNXQLIE 806
VL NA FK KF R+F+ S++ + ++ R + KY E+ Q++
Sbjct: 166 VLTNAFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENGQF--QVLS 223
Query: 807 IPYKGDQSSLIVVLPKTR 860
+PYK +L + LPKTR
Sbjct: 224 LPYKDTSFALSIFLPKTR 241
Score = 42.7 bits (96), Expect = 4e-04
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +2
Query: 344 DDAIRTEFASKSRDLR-SIKGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFS 520
D+ + F++ S L + KG E+ +AN ++ + + + + G ++F
Sbjct: 70 DEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFE 129
Query: 521 KNTVAAKSINEWVEKNTNNRIKXLVNPESLN 613
+A++IN +V +NT IK ++NP+S++
Sbjct: 130 DQEASAEAINNFVSENTKGHIKKIINPDSIS 160
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 41.5 bits (93), Expect = 9e-04
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 344 DDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFS 520
D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F ++D +
Sbjct: 60 DEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
Query: 521 KNTVAAKSINEWVEKNTNNRIKXLVNPESL 610
A + IN +V TN +IK + +S+
Sbjct: 120 -TPAAVQEINSFVNTATNGKIKNIATQDSI 148
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYK-RGDYKYGESAALNXQLIE 806
+L+N+I FK KFD ++DF + K+ M + D + + ++
Sbjct: 154 LLINSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFMKEFMNDRSFSSDDVFD--VLH 211
Query: 807 IPYKGDQSSLIVVLPKTR 860
+ Y + V LPK R
Sbjct: 212 VAYSDQRYQFSVFLPKLR 229
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 41.5 bits (93), Expect = 9e-04
Identities = 20/73 (27%), Positives = 39/73 (53%)
Frame = +2
Query: 392 SIKGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFSKNTVAAKSINEWVEKNT 571
S+ VE +AN+++V + + F R IDF K+ AAK +N+++ ++T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 572 NNRIKXLVNPESL 610
+I ++ P++L
Sbjct: 144 KGKIPDMIKPDNL 156
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 41.5 bits (93), Expect = 9e-04
Identities = 20/73 (27%), Positives = 39/73 (53%)
Frame = +2
Query: 392 SIKGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFSKNTVAAKSINEWVEKNT 571
S+ VE +AN+++V + + F R IDF K+ AAK +N+++ ++T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 572 NNRIKXLVNPESL 610
+I ++ P++L
Sbjct: 144 KGKIPDMIKPDNL 156
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 41.5 bits (93), Expect = 9e-04
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 344 DDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVXRGRLXFGRPNIDFS 520
D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F ++D +
Sbjct: 60 DEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
Query: 521 KNTVAAKSINEWVEKNTNNRIKXLVNPESL 610
A + IN +V TN +IK + +S+
Sbjct: 120 -TPAAVQEINSFVNTATNGKIKNIATQDSI 148
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 630 VLVNAIXFKGPGVLKFDXRLAXDRDFYVSKDXTIKVPMMYK-RGDYKYGESAALNXQLIE 806
+L+N+I FK KFD ++DF + K+ M + D + + ++
Sbjct: 154 LLINSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFMKEFMNDRSFSSDDVFD--VLH 211
Query: 807 IPYKGDQSSLIVVLPKTR 860
+ Y + V LPK R
Sbjct: 212 VAYSDQRYQFSVFLPKLR 229
>Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical
protein C32A3.1b protein.
Length = 468
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/70 (22%), Positives = 31/70 (44%)
Frame = +2
Query: 437 HDGGKLDENFAVVXRGRLXFGRPNIDFSKNTVAAKSINEWVEKNTNNRIKXLVNPESLNS 616
H G +L + + R RP + ++ V A N + E R++ N E++N+
Sbjct: 42 HSGEELHRQRSELARANYEKARPEMIANQRAVTAHLFNRYTEDEERKRVEQQKNKEAMNA 101
Query: 617 TTGGCSRQRH 646
+T + R+
Sbjct: 102 STSAPTSSRN 111
>Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical
protein C32A3.1a protein.
Length = 490
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/70 (22%), Positives = 31/70 (44%)
Frame = +2
Query: 437 HDGGKLDENFAVVXRGRLXFGRPNIDFSKNTVAAKSINEWVEKNTNNRIKXLVNPESLNS 616
H G +L + + R RP + ++ V A N + E R++ N E++N+
Sbjct: 64 HSGEELHRQRSELARANYEKARPEMIANQRAVTAHLFNRYTEDEERKRVEQQKNKEAMNA 123
Query: 617 TTGGCSRQRH 646
+T + R+
Sbjct: 124 STSAPTSSRN 133
>AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein.
Length = 468
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/70 (22%), Positives = 31/70 (44%)
Frame = +2
Query: 437 HDGGKLDENFAVVXRGRLXFGRPNIDFSKNTVAAKSINEWVEKNTNNRIKXLVNPESLNS 616
H G +L + + R RP + ++ V A N + E R++ N E++N+
Sbjct: 42 HSGEELHRQRSELARANYEKARPEMIANQRAVTAHLFNRYTEDEERKRVEQQKNKEAMNA 101
Query: 617 TTGGCSRQRH 646
+T + R+
Sbjct: 102 STSAPTSSRN 111
>AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein.
Length = 490
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/70 (22%), Positives = 31/70 (44%)
Frame = +2
Query: 437 HDGGKLDENFAVVXRGRLXFGRPNIDFSKNTVAAKSINEWVEKNTNNRIKXLVNPESLNS 616
H G +L + + R RP + ++ V A N + E R++ N E++N+
Sbjct: 64 HSGEELHRQRSELARANYEKARPEMIANQRAVTAHLFNRYTEDEERKRVEQQKNKEAMNA 123
Query: 617 TTGGCSRQRH 646
+T + R+
Sbjct: 124 STSAPTSSRN 133
>Z93377-7|CAB07571.2| 197|Caenorhabditis elegans Hypothetical
protein F13A7.11 protein.
Length = 197
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 515 FSKNTVAAKSINEWVEKNTNNRIKXLVNPESLNSTTGGC 631
F + ++K +V + N + + +N ESLNS+T GC
Sbjct: 33 FENDDASSKDFEPFVVYSLNKKKRWEINEESLNSSTEGC 71
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 257 ENAERTTLXPWIIFHYFGKHSGGEVIVSIFEYIREICDGCH 135
E A++ T WI FH +HS I +FE IR+ CH
Sbjct: 22 EKAQKNTFTRWINFH-LEEHSSSGRIEDLFEDIRDGVLLCH 61
>AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p450
family protein 34A6 protein.
Length = 498
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 312 RAFEKLSASLTTMLYEQNSRVKAVT-FDQLKALSLKWRTKYTF 437
+ FE+L LT M E +S ++ V LK+ +KWRTK TF
Sbjct: 197 KEFEELKTKLT-MALENSSIIEGVMPLWLLKSKFMKWRTKTTF 238
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 257 ENAERTTLXPWIIFHYFGKHSGGEVIVSIFEYIREICDGCH 135
E A++ T WI FH +HS I +FE IR+ CH
Sbjct: 22 EKAQKNTFTRWINFH-LEEHSSSGRIEDLFEDIRDGVLLCH 61
>AF039050-5|AAC47938.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 34A8 protein.
Length = 499
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 318 FEKLSASLTTMLYEQNSRVKAVTFDQLKALSLKWRTKYTF---MMVEN*TRILQSFXGDV 488
FEKL SL L + + LK+ +KWRTK TF +EN T L S GD
Sbjct: 199 FEKLKTSLAEALENISIIEGFLPLWVLKSPLMKWRTKITFAPVAAIENGTHTL-SEEGDD 257
Query: 489 F 491
F
Sbjct: 258 F 258
>Z81047-1|CAB02827.1| 490|Caenorhabditis elegans Hypothetical
protein C41G6.1 protein.
Length = 490
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 318 FEKLSASLTTMLYEQNSRVKAVTFDQLKALSLKWRTKYTFMMVE 449
FE + LT L E + + LK+ L+WRTKYT VE
Sbjct: 196 FETMKVYLTKALEEVSIFEAFLPVWLLKSNLLRWRTKYTLAPVE 239
>AF022978-2|AAG24183.1| 440|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 130 protein.
Length = 440
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 248 ERTTLXPWIIFHYFGKHSGGEVIVSIFEYIREICDGCH 135
E T + + FHY GK GGE++ ++ + D H
Sbjct: 343 ELTYMLCQLCFHYAGKRYGGEILEVTEKFQENLADNLH 380
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,482,246
Number of Sequences: 27780
Number of extensions: 317520
Number of successful extensions: 788
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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