Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_E11
         (949 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.0  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           22   7.1  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           22   7.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   9.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   9.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   9.3  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 169 LSTLERFVTAAIAAMASVNKQMIGXMFVACGVSN 68
           LSTL  F      A++S+N+Q      +  G+++
Sbjct: 867 LSTLVEFALELKKALSSINEQSFNHFVLKMGINH 900


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 608 LNSTTGGCSRQRHLXQGTWS 667
           ++  TG   RQ+ L Q TW+
Sbjct: 18  IDQATGLTERQKKLVQNTWA 37


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 608 LNSTTGGCSRQRHLXQGTWS 667
           ++  TG   RQ+ L Q TW+
Sbjct: 18  IDQATGLTERQKKLVQNTWA 37


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 500 RPNIDFSKNTVAAKSINEWVEKN 568
           R   +FSK     K + EW  KN
Sbjct: 145 RGKYEFSKYDKLKKKLEEWTGKN 167


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 500 RPNIDFSKNTVAAKSINEWVEKN 568
           R   +FSK     K + EW  KN
Sbjct: 160 RGKYEFSKYDKLKKKLEEWTGKN 182


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 500 RPNIDFSKNTVAAKSINEWVEKN 568
           R   +FSK     K + EW  KN
Sbjct: 48  RGKYEFSKYDKLKKKLEEWTGKN 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,137
Number of Sequences: 438
Number of extensions: 4208
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31081323
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)