Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_E08
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0867 - 6600847-6601413,6601954-6602181                           30   2.9  
11_04_0147 - 14095039-14095937,14096914-14097379                       29   3.9  
02_05_0734 + 31318380-31318610,31319422-31319988                       29   3.9  
07_03_1180 - 24601631-24602142,24602518-24602581,24602811-246028...    29   5.2  
01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615,225...    29   5.2  
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368...    29   6.8  
05_07_0051 - 27338512-27338617,27338790-27338950                       28   9.0  
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605...    28   9.0  

>06_01_0867 - 6600847-6601413,6601954-6602181
          Length = 264

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -2

Query: 406 HCPHWCPCEILDYEFQNVHD*K*SPYHDYCGSCYSNEHIFRQAF 275
           HC  W P  IL   F N      S YHD     Y N++ F Q F
Sbjct: 186 HCGLWLPGNILHVFFSNN-----SAYHDIHHQLYGNKYNFSQPF 224


>11_04_0147 - 14095039-14095937,14096914-14097379
          Length = 454

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 388 GTNVDSDSLSKVLRGLGFSVTVLH-NLRAED 477
           G  +    L+ VLR  GFS+TVLH  LRA D
Sbjct: 17  GHTIPMFHLAAVLRSRGFSITVLHTELRAPD 47


>02_05_0734 + 31318380-31318610,31319422-31319988
          Length = 265

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -2

Query: 406 HCPHWCPCEILDYEFQNVHD*K*SPYHDYCGSCYSNEHIFRQAF 275
           HC  W P  IL   F N      S YHD     Y N++ F Q F
Sbjct: 187 HCGLWLPGNILHALFNNN-----SAYHDIHHQLYGNKYNFSQPF 225


>07_03_1180 -
           24601631-24602142,24602518-24602581,24602811-24602876,
           24602949-24603070,24603170-24603344,24603466-24603701,
           24603781-24604129,24605009-24605146,24605242-24605289
          Length = 569

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
 Frame = +1

Query: 172 KKNNGSGTEQRKNGNEDEGDAWGSHG---SSQGRRYAKMPVERYAHYYNMNHNNRG 330
           +  NG G  Q  NG    GD +  +G   +  G RY +   E Y +     H   G
Sbjct: 475 QNGNGGGYHQNGNGYHQNGDGYHQNGNRYNQNGNRYHQNGDEYYQNGNGNGHRQNG 530


>01_01_0272 -
           2249662-2249721,2250110-2250335,2250419-2250615,
           2250707-2250955,2251047-2251176,2251473-2251564,
           2251735-2251855,2251940-2252028,2252149-2252271,
           2252379-2252506,2253039-2253147,2253701-2254000
          Length = 607

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 184 GSGTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPVERYAH 300
           GSG+ ++ NG  +      S GS  G++  K    R+ H
Sbjct: 541 GSGSRKKSNGKHENSSDDDSDGSCDGKKKKKAKKTRFTH 579


>05_07_0310 +
           29135875-29136052,29136206-29136617,29136723-29136867,
           29137944-29138102,29138183-29138242,29138349-29138546
          Length = 383

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +1

Query: 154 KMADEEKKNNGSGTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPV 285
           K A+ E+  N      R  G  D G  +G +  + GRR A  PV
Sbjct: 327 KPAEGERYYNPGRGRGRGRGRGDRGGFYGGYNGNGGRRQAAAPV 370


>05_07_0051 - 27338512-27338617,27338790-27338950
          Length = 88

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 190 GTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPVE 288
           G  Q  NG E EG      GS+ GRR+ +M  E
Sbjct: 55  GVPQSVNGEETEGIGRRRGGSNDGRRHGEMAPE 87


>04_04_1400 -
           33259716-33260069,33260172-33260219,33260471-33260596,
           33260850-33260900,33260963-33261055,33261217-33261272,
           33261465-33261522,33262306-33262365,33262513-33262623,
           33263368-33263949,33264026-33264097
          Length = 536

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 154 KMADEEKKNNGSGTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPVER 291
           K+  + +++ G G+E     +ED+ D  GS  S       +   ER
Sbjct: 126 KVGGDREEDKGGGSESGSGSDEDDSDGSGSDDSEDSEEERRREEER 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,248,268
Number of Sequences: 37544
Number of extensions: 426020
Number of successful extensions: 1150
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)