Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_E07
         (920 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090...    31   1.7  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    31   1.7  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   6.9  
05_03_0637 - 16465433-16466242                                         29   6.9  
11_06_0016 - 19284810-19284926,19285527-19286879                       28   9.1  
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047...    28   9.1  

>09_06_0107 +
           20907560-20908491,20908511-20908625,20908967-20909058,
           20909293-20909556,20910714-20911494
          Length = 727

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 772 PPPXHNVXKXXXXGNXPXTPXSPFFPXXXPPPPLS 876
           P P H+V         P +P  P  P   PPPPLS
Sbjct: 63  PHPHHHVSAAPPPPQTPPSPPPPPPPPPPPPPPLS 97


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +1

Query: 820  PXTPXSPFFPXXXPPPPLSXXXPP 891
            P  P SP  P   PPPPL    PP
Sbjct: 1171 PPPPLSPSLPPPPPPPPLPSGPPP 1194


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
 Frame = +3

Query: 732 PTXSINPXVSPXXPXPXTQRXEKXXXRKXPXNPXFP----FFPXXXPPPSSFXXXPPXY 896
           P   + P  SP  P P           + P  P FP    F+P   PPP      PP +
Sbjct: 276 PFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSF 334


>05_03_0637 - 16465433-16466242
          Length = 269

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/44 (29%), Positives = 16/44 (36%)
 Frame = -2

Query: 535 AAXEXTGXPPXXPXXXKXPPXRPXSFXRXLGXFXXQXXPPXPPP 404
           +A   T  PP  P   + P   P    +       Q  PP PPP
Sbjct: 128 SAASSTSAPPLRPLLPRPPHLHPAFHHQPFHHHLLQPQPPPPPP 171


>11_06_0016 - 19284810-19284926,19285527-19286879
          Length = 489

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
 Frame = -2

Query: 511 PPXXPXXXKX--PPXRPXSFXRXLGXFXXQXXPPXPPPXP 398
           PP  P   +   PP  P S     G    Q  PP PPP P
Sbjct: 52  PPLHPVGDRAIHPPMPPASAAAGDGAAPDQEPPPSPPPPP 91


>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
            27505576-27507522,27508478-27508946,27509898-27510079,
            27510746-27511208,27511295-27511691,27511810-27511937,
            27512106-27512273,27512452-27512559,27512830-27512838
          Length = 1382

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +1

Query: 772  PPPXHNVXKXXXXGNXPXTPXSPFFPXXXPPPPLSXXXPP 891
            PP  +N          P  P  P  P   PPPP++   PP
Sbjct: 1139 PPAPYNCGYAGHANQMPLPPPPP--PPLPPPPPVAPFHPP 1176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,508,029
Number of Sequences: 37544
Number of extensions: 240618
Number of successful extensions: 914
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)