Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_E05
(964 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 160 6e-38
UniRef50_UPI0000DB724B Cluster: PREDICTED: similar to eukaryotic... 153 6e-36
UniRef50_UPI0000D9F481 Cluster: PREDICTED: similar to eukaryotic... 116 9e-25
UniRef50_Q5CD84 Cluster: Eukaryotic peptide chain release factor... 113 6e-24
UniRef50_Q9NAX8 Cluster: Eukaryotic peptide chain release factor... 95 2e-18
UniRef50_Q9NCP1 Cluster: Eukaryotic peptide chain release factor... 79 1e-13
UniRef50_Q8SRZ6 Cluster: PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1;... 74 6e-12
UniRef50_Q965E7 Cluster: Eukaryotic polypeptide chain release fa... 66 2e-09
UniRef50_A2EPZ2 Cluster: Eukaryotic release factor 1, putative; ... 62 2e-08
UniRef50_UPI000150A1F7 Cluster: eRF1 domain 1 family protein; n=... 61 4e-08
UniRef50_Q98RP4 Cluster: Eukaryotic release factor 1 homolog; n=... 55 2e-06
UniRef50_P58227 Cluster: Peptide chain release factor subunit 1;... 43 0.010
UniRef50_Q8U0J4 Cluster: Peptide chain release factor subunit 1;... 41 0.054
UniRef50_Q58239 Cluster: Peptide chain release factor subunit 1;... 41 0.054
UniRef50_Q9YAF1 Cluster: Peptide chain release factor subunit 1;... 36 1.5
UniRef50_P75267 Cluster: Putative adhesin P1-like protein MPN131... 35 2.7
UniRef50_Q0QZI1 Cluster: Gp47; n=1; Phage Syn9|Rep: Gp47 - Phage... 34 4.7
UniRef50_Q4UGU2 Cluster: Putative uncharacterized protein; n=2; ... 34 6.2
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 160 bits (388), Expect = 6e-38
Identities = 72/101 (71%), Positives = 83/101 (82%)
Frame = +3
Query: 135 WXHLDXQSYVLKSHATNQETILHLTPEQXKDKSHFTDKESGVELELVECQPLLEWLANNY 314
+ +LD YVL T +E IL+LTPEQ KDKSHFTDKE+G E EL+E PLLEW ANNY
Sbjct: 323 YENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNY 382
Query: 315 KSFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKVDFQSMQ 437
K FGATLEI+TDKSQEGSQFV+GFGGIGG+LRY+VDFQ M+
Sbjct: 383 KKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGME 423
>UniRef50_UPI0000DB724B Cluster: PREDICTED: similar to eukaryotic
release factor 1 CG5605-PA, isoform A; n=1; Apis
mellifera|Rep: PREDICTED: similar to eukaryotic release
factor 1 CG5605-PA, isoform A - Apis mellifera
Length = 265
Score = 153 bits (371), Expect = 6e-36
Identities = 75/89 (84%), Positives = 79/89 (88%), Gaps = 3/89 (3%)
Frame = +3
Query: 183 NQETILH-LTPEQXK--DKSHFTDKESGVELELVECQPLLEWLANNYKSFGATLEIITDK 353
N +LH T + K DK+HFTDKESGVELELVECQPLLEWLANNYKSFGATLEIITDK
Sbjct: 164 NTREVLHKFTVDLPKKHDKTHFTDKESGVELELVECQPLLEWLANNYKSFGATLEIITDK 223
Query: 354 SQEGSQFVRGFGGIGGLLRYKVDFQSMQL 440
SQEGSQFVRGFGGIGG+LRYKVDFQSMQL
Sbjct: 224 SQEGSQFVRGFGGIGGILRYKVDFQSMQL 252
>UniRef50_UPI0000D9F481 Cluster: PREDICTED: similar to eukaryotic
translation termination factor 1; n=2; Macaca
mulatta|Rep: PREDICTED: similar to eukaryotic
translation termination factor 1 - Macaca mulatta
Length = 136
Score = 116 bits (279), Expect = 9e-25
Identities = 54/78 (69%), Positives = 62/78 (79%)
Frame = +3
Query: 204 LTPEQXKDKSHFTDKESGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRG 383
LTPEQ KD SHF DKE+G E EL+E PLLEW ANNYK GATLEI+TDKSQE SQFV+G
Sbjct: 47 LTPEQEKDTSHFIDKETGWEHELIESIPLLEWFANNYKKCGATLEIVTDKSQEMSQFVKG 106
Query: 384 FGGIGGLLRYKVDFQSMQ 437
FG G+L Y+VDFQ ++
Sbjct: 107 FGRSAGILWYRVDFQGIE 124
>UniRef50_Q5CD84 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=5; Eukaryota|Rep: Eukaryotic peptide chain
release factor subunit 1 - Loxodes striatus
Length = 436
Score = 113 bits (272), Expect = 6e-24
Identities = 50/101 (49%), Positives = 74/101 (73%)
Frame = +3
Query: 135 WXHLDXQSYVLKSHATNQETILHLTPEQXKDKSHFTDKESGVELELVECQPLLEWLANNY 314
W +L+ + LK+ T +E+ + L+P+Q +K+HF D+ + EL +VE L EWL +NY
Sbjct: 321 WENLEFIWFKLKNPVTKEESTVVLSPQQATEKNHFQDEANQCELNIVERFALTEWLIDNY 380
Query: 315 KSFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKVDFQSMQ 437
K++GA LE +TD+SQEGSQFV+GFGGI G LRY+V+F+ M+
Sbjct: 381 KNYGARLEFVTDRSQEGSQFVKGFGGICGFLRYEVNFEKME 421
>UniRef50_Q9NAX8 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=6; Trypanosomatidae|Rep: Eukaryotic peptide
chain release factor subunit 1 - Trypanosoma brucei
brucei
Length = 452
Score = 95.5 bits (227), Expect = 2e-18
Identities = 41/87 (47%), Positives = 63/87 (72%)
Frame = +3
Query: 177 ATNQETILHLTPEQXKDKSHFTDKESGVELELVECQPLLEWLANNYKSFGATLEIITDKS 356
A ++ET +H+ E+ +S+ +ESG +E + ++WLA NY+ FG LE+IT++S
Sbjct: 340 ADDEETFVHVMSEEEAKRSNIHMQESGKTRNEIEQEDFVDWLATNYRKFGCALELITNRS 399
Query: 357 QEGSQFVRGFGGIGGLLRYKVDFQSMQ 437
QEG+QFVRGFGGIGG+LRYK+D +++
Sbjct: 400 QEGTQFVRGFGGIGGVLRYKLDIIALR 426
>UniRef50_Q9NCP1 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=2; Giardia intestinalis|Rep: Eukaryotic
peptide chain release factor subunit 1 - Giardia lamblia
(Giardia intestinalis)
Length = 457
Score = 79.4 bits (187), Expect = 1e-13
Identities = 38/83 (45%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Frame = +3
Query: 180 TNQETILHLTPEQXKDKSHFTDKESG--VELELVECQPLLEWLANNYKSFGATLEIITDK 353
T+ I +L Q + + + +G V+L+++ Q LLEW +NYK++GA+LE IT++
Sbjct: 351 TSAPVIKYLLKSQMSNPKYLREVINGEEVQLDIMGDQLLLEWFVDNYKNYGASLEFITNR 410
Query: 354 SQEGSQFVRGFGGIGGLLRYKVD 422
S EG+QF GFGGIGGLLR++VD
Sbjct: 411 SAEGTQFCSGFGGIGGLLRWQVD 433
>UniRef50_Q8SRZ6 Cluster: PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1;
n=1; Encephalitozoon cuniculi|Rep: PEPTIDE CHAIN RELEASE
FACTOR SUBUNIT 1 - Encephalitozoon cuniculi
Length = 386
Score = 73.7 bits (173), Expect = 6e-12
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +3
Query: 267 ELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKVDFQ 428
EL + + ++W+A NYKSFG L ++DKS EG QF+ GFGG+GG+LRY+VD +
Sbjct: 317 ELKDEELFVDWIAENYKSFGCILAFVSDKSAEGMQFIEGFGGVGGILRYRVDME 370
>UniRef50_Q965E7 Cluster: Eukaryotic polypeptide chain release
factor 1; n=3; Paramecium tetraurelia|Rep: Eukaryotic
polypeptide chain release factor 1 - Paramecium
tetraurelia
Length = 437
Score = 65.7 bits (153), Expect = 2e-09
Identities = 27/85 (31%), Positives = 53/85 (62%)
Frame = +3
Query: 168 KSHATNQETILHLTPEQXKDKSHFTDKESGVELELVECQPLLEWLANNYKSFGATLEIIT 347
+S T Q+ I ++ + + ++++G + ++ + L+E L+ +K +G ++IT
Sbjct: 335 QSKQTEQKAIKYIKGNEGYEAGSLIEEKNGEQFVILVKEDLVEHLSEKFKDYGLDFQLIT 394
Query: 348 DKSQEGSQFVRGFGGIGGLLRYKVD 422
D S EG+QF++GF G+GG LR+K+D
Sbjct: 395 DHSVEGNQFMKGFSGLGGFLRFKMD 419
>UniRef50_A2EPZ2 Cluster: Eukaryotic release factor 1, putative;
n=2; Trichomonas vaginalis|Rep: Eukaryotic release
factor 1, putative - Trichomonas vaginalis G3
Length = 438
Score = 62.5 bits (145), Expect = 2e-08
Identities = 25/46 (54%), Positives = 36/46 (78%)
Frame = +3
Query: 288 LLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKVDF 425
L EW+A+++K GA LE +TDKS EG+QF++G GIG LLR+++ F
Sbjct: 370 LTEWMADHHKEKGAKLEFVTDKSPEGAQFIKGLSGIGALLRFQMSF 415
>UniRef50_UPI000150A1F7 Cluster: eRF1 domain 1 family protein; n=1;
Tetrahymena thermophila SB210|Rep: eRF1 domain 1 family
protein - Tetrahymena thermophila SB210
Length = 519
Score = 61.3 bits (142), Expect = 4e-08
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Frame = +3
Query: 147 DXQSYVLKSHATNQETILHLTPEQXKDKSHFTDKESGVE-------LELVECQPLLEWLA 305
+ Q + + T +ETI +L P Q K K S E L++ Q + EW+
Sbjct: 392 ELQRVTVYNSKTQEETIQYLMPSQVKALQDSISKTSDQEANNKKNQLQVYSQQNINEWIV 451
Query: 306 NNYKSFGATLEII--TDKSQEGSQFVRGFGGIGGLLRYKVDFQSM 434
N SF LEI+ +DK+Q+G QF + F G+G L+Y +D+ S+
Sbjct: 452 ENISSFSQDLEIVFVSDKTQQGVQFSKSFQGVGAYLKYSLDYSSL 496
>UniRef50_Q98RP4 Cluster: Eukaryotic release factor 1 homolog; n=1;
Guillardia theta|Rep: Eukaryotic release factor 1
homolog - Guillardia theta (Cryptomonas phi)
Length = 409
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/93 (32%), Positives = 50/93 (53%)
Frame = +3
Query: 135 WXHLDXQSYVLKSHATNQETILHLTPEQXKDKSHFTDKESGVELELVECQPLLEWLANNY 314
W +L+ + V TN E I+ DK+ D+ + +C +++W+ N
Sbjct: 320 WENLEIERMVYIDSFTNLE-IVKFKKINECDKTECLDENPKLVFS-AKCN-VIDWVIENK 376
Query: 315 KSFGATLEIITDKSQEGSQFVRGFGGIGGLLRY 413
+ IITD++ EG+QFV+GFGGIGG+L++
Sbjct: 377 NKCETQIYIITDRTPEGAQFVKGFGGIGGILKF 409
>UniRef50_P58227 Cluster: Peptide chain release factor subunit 1;
n=5; Thermoplasmatales|Rep: Peptide chain release factor
subunit 1 - Thermoplasma volcanium
Length = 418
Score = 43.2 bits (97), Expect = 0.010
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +3
Query: 243 DKESGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGLLRY 413
DK+ G LEL+ ++E L K GA +EII+D+S EG + FGG+ +LR+
Sbjct: 353 DKD-GTPLELIGEDDMIEDLYKLAKESGAQVEIISDQSDEGKLLKQAFGGLAAVLRF 408
>UniRef50_Q8U0J4 Cluster: Peptide chain release factor subunit 1;
n=5; Archaea|Rep: Peptide chain release factor subunit 1
- Pyrococcus furiosus
Length = 420
Score = 40.7 bits (91), Expect = 0.054
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +3
Query: 324 GATLEIITDKSQEGSQFVRGFGGIGGLLRYKV 419
G+ +EII+ ++EG QF R FGG+G +LR+++
Sbjct: 386 GSNVEIISLDTEEGQQFYRAFGGLGAILRFRI 417
>UniRef50_Q58239 Cluster: Peptide chain release factor subunit 1;
n=12; Euryarchaeota|Rep: Peptide chain release factor
subunit 1 - Methanococcus jannaschii
Length = 421
Score = 40.7 bits (91), Expect = 0.054
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +3
Query: 255 GVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKV 419
G L +VE + +E+L+ + GA L ++ +++EG+ + F GI +LRYK+
Sbjct: 365 GGALSIVEEKDYIEYLSELCEQSGAKLVTVSSETEEGAMILNAFKGIAAILRYKI 419
>UniRef50_Q9YAF1 Cluster: Peptide chain release factor subunit 1;
n=9; Thermoprotei|Rep: Peptide chain release factor
subunit 1 - Aeropyrum pernix
Length = 373
Score = 35.9 bits (79), Expect = 1.5
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 282 QPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKV 419
+ L EW+ KS GA + ++ + E F++ FGG+ G+LR+++
Sbjct: 326 EDLEEWV-EKAKSSGAQVIVVPESLAEAEWFLKTFGGLAGILRFRI 370
>UniRef50_P75267 Cluster: Putative adhesin P1-like protein MPN131;
n=2; Mycoplasma pneumoniae|Rep: Putative adhesin P1-like
protein MPN131 - Mycoplasma pneumoniae
Length = 221
Score = 35.1 bits (77), Expect = 2.7
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 124 VDLAGXTSTXKATX*SRMPPTRKQFST*RLNKXRTNHISPTKRAEWSWSLWSASRCWS-- 297
V +A TS T + +PPT T R +P+ + + W+ASRCWS
Sbjct: 142 VTVAEATSGDNLTNYTNLPPTSPPHPTDRTRCHSPTRTTPSGCSCSCAACWAASRCWSIR 201
Query: 298 -GWPITTSRLVPP 333
G IT S L+PP
Sbjct: 202 VGKMITVS-LIPP 213
>UniRef50_Q0QZI1 Cluster: Gp47; n=1; Phage Syn9|Rep: Gp47 - Phage
Syn9
Length = 184
Score = 34.3 bits (75), Expect = 4.7
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +3
Query: 135 WXHLDXQSYVLKSHATNQETILHLTPEQXKDKSHFTDKESGVELELVECQPL 290
W + Q VLKSH+ + ++T K + FTD E+G E+ VE +PL
Sbjct: 86 WINFHTQDDVLKSHSHDYPIHGYITLTNHKTDTVFTDGENGKEVWRVENKPL 137
>UniRef50_Q4UGU2 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 522
Score = 33.9 bits (74), Expect = 6.2
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 249 ESGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGLLRY 413
++GV L+++E L WL N+Y F AT +T S+ ++ ++ FG ++ Y
Sbjct: 392 KNGVLLDILESDQNLVWLCNSYHRFYATTFNMTANSKLLTKLIKAFGYKVSVINY 446
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,906,496
Number of Sequences: 1657284
Number of extensions: 7983516
Number of successful extensions: 20513
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20508
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 89407040613
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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