Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_E01
         (895 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   4.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   4.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   4.3  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   7.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   9.9  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 620 PVRIQVLASGSRHQRQLALVFQHLHLVSQHRKLVLQRQ 733
           P RI++ AS    +RQ+ + FQ+  +  +H++  L +Q
Sbjct: 32  PRRIEIAASLDLTERQVKVWFQNRRM--KHKRQTLGKQ 67


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/26 (26%), Positives = 10/26 (38%)
 Frame = +3

Query: 345 QFCIWC*NNKCSTFTIFISIDNDYNC 422
           ++  WC  N C      +   N Y C
Sbjct: 98  EYVDWCSTNPCENQATCVQNKNQYQC 123


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 620 PVRIQVLASGSRHQRQLALVFQHLHLVSQHRKLVLQRQ 733
           P RI++ AS    +RQ+ + FQ+  +  +H++  L +Q
Sbjct: 163 PRRIEIAASLDLTERQVKVWFQNRRM--KHKRQTLGKQ 198


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 634 LYSHWNRMLGQQLVWQVYRMPVVLWW 557
           +Y H   MLG Q ++ +  + VV++W
Sbjct: 242 VYLHLAVMLGFQDIYMIVYIIVVIFW 267


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 634 LYSHWNRMLGQQLVWQVYRMPVVLWW 557
           +Y H   MLG Q ++ +  + VV++W
Sbjct: 242 VYLHLAVMLGFQDIYMIVYIIVVIFW 267


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 516 SECRTGPESVVWCNH 560
           S C  G  S  WCN+
Sbjct: 136 SSCHQGFSSSTWCNY 150


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 398 DENGEGAAFV 369
           DENGEG A+V
Sbjct: 370 DENGEGGAWV 379


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,759
Number of Sequences: 336
Number of extensions: 3499
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)