Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_D18
         (840 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5JUU8 Cluster: Formin B; n=2; Trypanosoma brucei|Rep: ...    39   0.18 
UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    36   1.7  
UniRef50_Q8W0F9 Cluster: C2 domain-containing protein-like; n=3;...    33   8.9  
UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma j...    33   8.9  
UniRef50_Q6FIZ5 Cluster: Similarity; n=1; Candida glabrata|Rep: ...    33   8.9  

>UniRef50_A5JUU8 Cluster: Formin B; n=2; Trypanosoma brucei|Rep:
           Formin B - Trypanosoma brucei TREU927
          Length = 1004

 Score = 38.7 bits (86), Expect = 0.18
 Identities = 20/55 (36%), Positives = 20/55 (36%)
 Frame = +3

Query: 675 GGXKKXXPPPXXXXKKKXXGGXFFFPPXGGXKKXPPPPPXGXXXXXXGGGXXXXP 839
           GG     PPP         GG    PP  G K  PPPPP        GGG    P
Sbjct: 507 GGKLPPPPPPPGKAPPPPPGGKLPPPPPPGGKGAPPPPPPPPGKLGPGGGPPPPP 561


>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 159

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 17/37 (45%), Positives = 18/37 (48%)
 Frame = -2

Query: 782 GGXFFXXPPRGEKKXXXXXFFFXXXXGGGGXFFXXPP 672
           GG     PP  +KK     FFF    GGGG FF  PP
Sbjct: 63  GGGAPPPPPPLKKKKKIFFFFFKKRGGGGGFFFFFPP 99



 Score = 34.7 bits (76), Expect = 2.9
 Identities = 18/38 (47%), Positives = 18/38 (47%)
 Frame = -3

Query: 784 GGGXFFXPPXGGKKXXPPXXFFXXXXXGGGXFFFXPPP 671
           GGG    PP   KK      FF     GGG FFF PPP
Sbjct: 63  GGGAPPPPPPLKKKKKIFFFFFKKRGGGGGFFFFFPPP 100


>UniRef50_Q8W0F9 Cluster: C2 domain-containing protein-like; n=3;
           Oryza sativa|Rep: C2 domain-containing protein-like -
           Oryza sativa subsp. japonica (Rice)
          Length = 327

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 14/53 (26%), Positives = 20/53 (37%)
 Frame = +1

Query: 682 KKKXPPPPXXXXKKXXXXXXFFSPRGGXKKXXPPPPPXGXXXFXXGGGXFXPP 840
           +++ PPPP            +F P        PPPP  G   +   GG +  P
Sbjct: 186 RERSPPPPEPQYPPPSSSPYYFPPPPPPAYSAPPPPQYGSEQYYRSGGYYSAP 238


>UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC03138 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 156

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
 Frame = -3

Query: 823 PPPXXXXXXPXGGGG----GXFFXPPXGGKKXXPPXXFFXXXXXGGGXFFF 683
           PPP      P GGGG      FF PP GG    PP         GG  FFF
Sbjct: 49  PPPPGGPPPPFGGGGFPPFFHFFPPPGGG--VAPPQGGGPPLGGGGFQFFF 97


>UniRef50_Q6FIZ5 Cluster: Similarity; n=1; Candida glabrata|Rep:
            Similarity - Candida glabrata (Yeast) (Torulopsis
            glabrata)
          Length = 1665

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +1

Query: 694  PPPPXXXXKKXXXXXXFFSPRGGXKKXXPPPPPXG 798
            PPPP    KK         P+G  KK  PPPPP G
Sbjct: 1116 PPPPHGQLKKKPPPPP---PQGQLKKKPPPPPPQG 1147


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,339,998
Number of Sequences: 1657284
Number of extensions: 10801191
Number of successful extensions: 21159
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18016
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)