Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_D18
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1377 + 36764461-36765339                                         33   0.28 
06_03_1310 + 29238644-29240260                                         29   4.6  
07_01_0479 + 3606663-3607448                                           29   6.1  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.1  
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998...    28   8.1  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    28   8.1  

>01_06_1377 + 36764461-36765339
          Length = 292

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 14/53 (26%), Positives = 20/53 (37%)
 Frame = +1

Query: 682 KKKXPPPPXXXXKKXXXXXXFFSPRGGXKKXXPPPPPXGXXXFXXGGGXFXPP 840
           +++ PPPP            +F P        PPPP  G   +   GG +  P
Sbjct: 151 RERSPPPPEPQYPPPSSSPYYFPPPPPPAYSAPPPPQYGSEQYYRSGGYYSAP 203


>06_03_1310 + 29238644-29240260
          Length = 538

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
 Frame = +3

Query: 696 PPPXXXXKKKXXGGXFFFPPXGGXK-KXPPPPPXG 797
           PP       +  GG   FPP  G     PPPPP G
Sbjct: 480 PPSSSWSPPQGGGGKLPFPPVHGVAYSSPPPPPSG 514


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = -1

Query: 570 FFXPPGXXXXXGGGXXPPP-PFXXXXXXGGPPKXIXG 463
           F  PPG      GG  PPP PF       GPP+   G
Sbjct: 187 FQRPPGVPPAFPGGPPPPPGPFMRGPPPMGPPQVRPG 223


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 15/37 (40%), Positives = 15/37 (40%)
 Frame = +1

Query: 688 KXPPPPXXXXKKXXXXXXFFSPRGGXKKXXPPPPPXG 798
           K PPPP               P GG K   PPPPP G
Sbjct: 351 KGPPPPPPPKGPSPPPPP---PPGGKKGGPPPPPPKG 384



 Score = 28.7 bits (61), Expect = 6.1
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 750 PPXGGXKKXPPPPP 791
           PP GG K  PPPPP
Sbjct: 368 PPPGGKKGGPPPPP 381


>07_03_0965 -
           22996575-22999112,22999202-22999636,22999717-22999801,
           22999888-22999957,23000050-23000293,23000396-23000482,
           23000655-23000706,23000830-23001226,23001324-23001648,
           23001748-23001914,23002007-23002547
          Length = 1646

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/49 (32%), Positives = 17/49 (34%)
 Frame = -2

Query: 839 GGXXXPPPXXXXXXPXGGGGGXFFXXPPRGEKKXXXXXFFFXXXXGGGG 693
           GG   PPP        GGGGG      PR   +            GGGG
Sbjct: 17  GGGGGPPPPRRRLRSSGGGGGGSGSGGPRDSPRSERRRGERLMLNGGGG 65


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 750  PPXGGXKKXPPPPPXG 797
            PP GG    PPPPP G
Sbjct: 1113 PPPGGITGVPPPPPIG 1128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,530,881
Number of Sequences: 37544
Number of extensions: 457622
Number of successful extensions: 1457
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)