Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_D15
(923 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.041
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.041
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.041
Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical pr... 35 0.071
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.12
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 34 0.12
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical pr... 32 0.67
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.67
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.88
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 0.88
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.5
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 31 1.5
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 31 1.5
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 30 2.0
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 30 2.7
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 30 2.7
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 30 2.7
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 30 2.7
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 30 2.7
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 30 2.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.7
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 29 3.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.6
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.7
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 4.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.7
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 29 4.7
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.2
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 8.2
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 8.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 8.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.2
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.041
Identities = 37/159 (23%), Positives = 44/159 (27%), Gaps = 6/159 (3%)
Frame = -1
Query: 683 PGGKTKXKXXPXXXAPXXGXXXXPXXLPAGXPPGX--GXXIPPPXGXPXRGPXXXXPXPR 510
P G P P G P AG PP G PPP G P P P P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 509 XXGRGXXGGXXKXXPXAPXXAPPXXPGKXXQKTXXXXXXKGXQXGXQKGXXPXXXGXPXR 330
G + P PP G Q P G P
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP-PTGSPPT 351
Query: 329 GTHXPXSPPK-XPFRTXLXTGGPQXGXXXAP---PXGAP 225
G+ PP+ P ++ + + G P P G P
Sbjct: 352 GSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 390
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -2
Query: 337 PXGGHTXPXPPQXTPSEPXXXRGGPKXGXXXPPPXG 230
P G + P P +P P RG P G PP G
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 318
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 6/62 (9%)
Frame = -2
Query: 355 PXFXGXPXGGHTXPXPPQXTPSEPXXXRGG---PKXGXXXPPPXGPXLXPXXG---XPXX 194
P G P T PP T S P GG P PPP P P G P
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 317
Query: 193 GG 188
GG
Sbjct: 318 GG 319
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.041
Identities = 37/159 (23%), Positives = 44/159 (27%), Gaps = 6/159 (3%)
Frame = -1
Query: 683 PGGKTKXKXXPXXXAPXXGXXXXPXXLPAGXPPGX--GXXIPPPXGXPXRGPXXXXPXPR 510
P G P P G P AG PP G PPP G P P P P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 509 XXGRGXXGGXXKXXPXAPXXAPPXXPGKXXQKTXXXXXXKGXQXGXQKGXXPXXXGXPXR 330
G + P PP G Q P G P
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP-PTGSPPT 372
Query: 329 GTHXPXSPPK-XPFRTXLXTGGPQXGXXXAP---PXGAP 225
G+ PP+ P ++ + + G P P G P
Sbjct: 373 GSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 411
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -2
Query: 337 PXGGHTXPXPPQXTPSEPXXXRGGPKXGXXXPPPXG 230
P G + P P +P P RG P G PP G
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 339
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 6/62 (9%)
Frame = -2
Query: 355 PXFXGXPXGGHTXPXPPQXTPSEPXXXRGG---PKXGXXXPPPXGPXLXPXXG---XPXX 194
P G P T PP T S P GG P PPP P P G P
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 338
Query: 193 GG 188
GG
Sbjct: 339 GG 340
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.041
Identities = 37/159 (23%), Positives = 44/159 (27%), Gaps = 6/159 (3%)
Frame = -1
Query: 683 PGGKTKXKXXPXXXAPXXGXXXXPXXLPAGXPPGX--GXXIPPPXGXPXRGPXXXXPXPR 510
P G P P G P AG PP G PPP G P P P P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 509 XXGRGXXGGXXKXXPXAPXXAPPXXPGKXXQKTXXXXXXKGXQXGXQKGXXPXXXGXPXR 330
G + P PP G Q P G P
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP-PTGSPPT 357
Query: 329 GTHXPXSPPK-XPFRTXLXTGGPQXGXXXAP---PXGAP 225
G+ PP+ P ++ + + G P P G P
Sbjct: 358 GSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 396
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -2
Query: 337 PXGGHTXPXPPQXTPSEPXXXRGGPKXGXXXPPPXG 230
P G + P P +P P RG P G PP G
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 324
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 6/62 (9%)
Frame = -2
Query: 355 PXFXGXPXGGHTXPXPPQXTPSEPXXXRGG---PKXGXXXPPPXGPXLXPXXG---XPXX 194
P G P T PP T S P GG P PPP P P G P
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 323
Query: 193 GG 188
GG
Sbjct: 324 GG 325
>Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical
protein F07H5.6 protein.
Length = 102
Score = 35.1 bits (77), Expect = 0.071
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = +2
Query: 395 GGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
GGG GGF G + G GG G G F G G G GG G
Sbjct: 37 GGGFGGFSGGYGLG-YGGGFGGYGGGFGGYGLGGYGLGYGGYG 78
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 441 GGGXXGGXGXXFXG--PPPXPXAXGPGXGGXG 530
GGG GG G G PPP P A G G GG G
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 69
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 441 GGGXXGGXGXXFXG--PPPXPXAXGPGXGGXG 530
GGG GG G G PPP P A G G GG G
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +2
Query: 368 FAXPFGXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
F P G GGG G G G GG G PP G G GG G
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 69
Score = 24.6 bits (51), Expect(2) = 4.3
Identities = 20/74 (27%), Positives = 20/74 (27%)
Frame = +1
Query: 433 GXXGGAXXGALGXLXWXPPXXPRPXXRGXGXXXXGPRXGXPXGGGIXXPNPGGXPAGKXX 612
G GG G PP P G G G G GGG GG G
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGG 153
Query: 613 GXXXXPXXGAXXXG 654
G G G
Sbjct: 154 GGCGGGGGGCGGGG 167
Score = 23.0 bits (47), Expect(2) = 4.3
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +1
Query: 217 GXGGAPXGGAXXXPXWGPPVXXXVRKGXFGGEXGXC 324
G GG GG PP G GG G C
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGC 72
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 34.3 bits (75), Expect = 0.12
Identities = 42/166 (25%), Positives = 44/166 (26%), Gaps = 7/166 (4%)
Frame = -1
Query: 692 GXXPGGKTKXKXXPXXXAPXXGXXXXPXXLPAGXPPGXGXXIPPPXGXPXRGPXXXXPXP 513
G P G P AP G P P+G PP G PP P P P
Sbjct: 354 GAPPSGGPPGPFDPSG-APPSGGPPGPFD-PSGAPPSGG---PPGPFDPSGAPPSGGPPG 408
Query: 512 RXXGRGXXGGXXKXXPXAPXXAPPXXPGKXXQKTXXXXXXKGXQXGXQKGXXPXXXGXPX 333
G P P APP G P G P
Sbjct: 409 PFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPG 468
Query: 332 R---GTHXPXSPPKXPFRTX--LXTGGPQX--GXXXAPPXGAPPXP 216
P P PF +GGP APP G PP P
Sbjct: 469 PFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 514
Score = 34.3 bits (75), Expect = 0.12
Identities = 42/166 (25%), Positives = 44/166 (26%), Gaps = 7/166 (4%)
Frame = -1
Query: 692 GXXPGGKTKXKXXPXXXAPXXGXXXXPXXLPAGXPPGXGXXIPPPXGXPXRGPXXXXPXP 513
G P G P AP G P P+G PP G PP P P P
Sbjct: 369 GAPPSGGPPGPFDPSG-APPSGGPPGPFD-PSGAPPSGG---PPGPFNPSGAPPSGGPPG 423
Query: 512 RXXGRGXXGGXXKXXPXAPXXAPPXXPGKXXQKTXXXXXXKGXQXGXQKGXXPXXXGXPX 333
G P P APP G P G P
Sbjct: 424 PFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPG 483
Query: 332 R---GTHXPXSPPKXPFRTX--LXTGGPQX--GXXXAPPXGAPPXP 216
P P PF +GGP APP G PP P
Sbjct: 484 PFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVP 529
Score = 29.9 bits (64), Expect = 2.7
Identities = 38/173 (21%), Positives = 39/173 (22%), Gaps = 7/173 (4%)
Frame = -2
Query: 697 PGGXXXGEKPKXKXPPXXGPXPXXXPXXXXFCRXGXPPGXXXXSXXXXXXXXXXXXXXXP 518
P G G PP GP P G PPG S
Sbjct: 282 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAQ--PSGGPPGPFNPSGAPPSGGPPGPFDPSG 339
Query: 517 XPG----PXAXGXGGGPXKXXPXPPXXP---PPXXXXKXXXXXXXXXXXXXXXXXXXXXX 359
P P G P P P P PP
Sbjct: 340 APPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG 399
Query: 358 GPXFXGXPXGGHTXPXPPQXTPSEPXXXRGGPKXGXXXPPPXGPXLXPXXGXP 200
P G P + PP P P G P G P P P P G P
Sbjct: 400 APPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG-GPPGPFNPSGAPPSGGP 451
Score = 29.5 bits (63), Expect = 3.6
Identities = 38/173 (21%), Positives = 39/173 (22%), Gaps = 7/173 (4%)
Frame = -2
Query: 697 PGGXXXGEKPKXKXPPXXGPXPXXXPXXXXFCRXGXPPGXXXXSXXXXXXXXXXXXXXXP 518
P G G PP GP P G PPG S
Sbjct: 342 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAP--PSGGPPGPFDPSGAPPSGGPPGPFDPSG 399
Query: 517 XPG----PXAXGXGGGPXKXXPXPPXXP---PPXXXXKXXXXXXXXXXXXXXXXXXXXXX 359
P P G P P P P PP
Sbjct: 400 APPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG 459
Query: 358 GPXFXGXPXGGHTXPXPPQXTPSEPXXXRGGPKXGXXXPPPXGPXLXPXXGXP 200
P G P + PP P P G P G P P P P G P
Sbjct: 460 APPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG-GPPGPFNPSGAPPSGGP 511
Score = 29.1 bits (62), Expect = 4.7
Identities = 38/173 (21%), Positives = 39/173 (22%), Gaps = 7/173 (4%)
Frame = -2
Query: 697 PGGXXXGEKPKXKXPPXXGPXPXXXPXXXXFCRXGXPPGXXXXSXXXXXXXXXXXXXXXP 518
P G G PP GP P G PPG S
Sbjct: 312 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAP--PSGGPPGPFNPSGAPPSGGPPGPFDPSG 369
Query: 517 XPG----PXAXGXGGGPXKXXPXPPXXP---PPXXXXKXXXXXXXXXXXXXXXXXXXXXX 359
P P G P P P P PP
Sbjct: 370 APPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG 429
Query: 358 GPXFXGXPXGGHTXPXPPQXTPSEPXXXRGGPKXGXXXPPPXGPXLXPXXGXP 200
P G P + PP P P G P G P P P P G P
Sbjct: 430 APPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG-GPPGPFNPSGAPPSGGP 481
Score = 29.1 bits (62), Expect = 4.7
Identities = 38/173 (21%), Positives = 39/173 (22%), Gaps = 7/173 (4%)
Frame = -2
Query: 697 PGGXXXGEKPKXKXPPXXGPXPXXXPXXXXFCRXGXPPGXXXXSXXXXXXXXXXXXXXXP 518
P G G PP GP P G PPG S
Sbjct: 327 PSGGPPGPFDPSGAPPSGGPPGPFNPSGAP--PSGGPPGPFDPSGAPPSGGPPGPFDPSG 384
Query: 517 XPG----PXAXGXGGGPXKXXPXPPXXP---PPXXXXKXXXXXXXXXXXXXXXXXXXXXX 359
P P G P P P P PP
Sbjct: 385 APPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG 444
Query: 358 GPXFXGXPXGGHTXPXPPQXTPSEPXXXRGGPKXGXXXPPPXGPXLXPXXGXP 200
P G P + PP P P G P G P P P P G P
Sbjct: 445 APPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG-GPPGPFDPSGAPPSGGP 496
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Frame = -1
Query: 641 APXXGXXXXPXXLPAGXPPGXGXXIPPPX---GXPXRGPXXXXPXPRXXGRGXXGGXXKX 471
AP P +P P G PPP G GP P P +G G K
Sbjct: 513 APMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAG-LKS 571
Query: 470 XPXAPXXAPPXXP 432
P P PP P
Sbjct: 572 VPGGPPPPPPPPP 584
>Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical
protein T19C4.7 protein.
Length = 74
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 398 GGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGG 517
GG GG +G G GG WG + G P G G G
Sbjct: 30 GGYGGGYGGGPWGYGGGWRRRHWGGYGGGPWGGYGGGPWG 69
Score = 31.5 bits (68), Expect = 0.88
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 380 FGXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXP 487
+G GGG G+ G + GG G WG + G P
Sbjct: 32 YGGGYGGGPWGYGGGWRRRHWGGYGGGPWGGYGGGP 67
>Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical
protein ZK596.1 protein.
Length = 241
Score = 31.9 bits (69), Expect = 0.67
Identities = 19/47 (40%), Positives = 19/47 (40%)
Frame = +2
Query: 377 PFGXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGG 517
PFG GG GGF G G GG G G G P G GG
Sbjct: 164 PFGGFPGGHQGGFPGG-NQGGFGGNQGGFGGNQGGFPFGNQGGNQGG 209
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +2
Query: 383 GXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
G GGG GG+ G G GG G G + G GP G G
Sbjct: 186 GGFGGGGMGGYGGGMGGGGYGGGGMGG-GGYGGGGDGGYGPSGGYGG 231
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +2
Query: 383 GXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
G GGG GG+ G G GG G G G G G GG G
Sbjct: 173 GGYGGGGDGGYGG---GGFGGGGMGGYGGGMGGGGYGGGGMGGGGYG 216
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +2
Query: 380 FGXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
+G GG GGF G + G GG G G G G GG G
Sbjct: 79 YGGSGGGAFGGFNGGYGQGGYGG-GGDFGGGMGGGGYGGGGYGGGGDG 125
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +3
Query: 441 GGGXXGGXGXXFXGPPPXPXAXGPGXGGXG 530
GGG GG G PPP P G G GG G
Sbjct: 62 GGGGCGGGGG--CAPPPAPCGGGCGGGGGG 89
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +3
Query: 441 GGGXXGGXGXXFXGPPPXPXAXGPGXGGXG 530
GGG GG G PPP P G G GG G
Sbjct: 39 GGGCGGGGGC---APPPAPCGGGCGGGGGG 65
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +3
Query: 441 GGGXXGGXGXXFXGPPPXPXAXGPGXGGXG 530
GGG GG G PPP P G G GG G
Sbjct: 62 GGGGCGGGGG--CAPPPAPCGGGCGGGGGG 89
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +3
Query: 441 GGGXXGGXGXXFXGPPPXPXAXGPGXGGXG 530
GGG GG G PPP P G G GG G
Sbjct: 39 GGGCGGGGGC---APPPAPCGGGCGGGGGG 65
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 31.5 bits (68), Expect = 0.88
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +2
Query: 377 PFGXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
P+G GGG GGF G G G G G + G G G G
Sbjct: 82 PYGQSRGGGRGGFGGSRGGGGYDGGRGGSRGGYDGGRGGYGGDRGGRGG 130
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.5
Identities = 40/147 (27%), Positives = 43/147 (29%), Gaps = 3/147 (2%)
Frame = -1
Query: 653 PXXXAPXXGXXXXPXXLPAGXPPGXGXXIPPPXGXPXRGPXXXXPXPRXXGRGXXGGXXK 474
P AP G P P G PP PPP P P+ GG
Sbjct: 322 PPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPP-------QQFHAPSPQ-----SFGGPPP 369
Query: 473 XXPXAP-XXAPPXXPGKXXQKTXXXXXXKGXQ-XGXQKGXXPXXXGXPXR-GTHXPXSPP 303
AP APP G Q G G P G P G++ P
Sbjct: 370 PVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGG 429
Query: 302 KXPFRTXLXTGGPQXGXXXAPPXGAPP 222
F GGP G PP G PP
Sbjct: 430 PGGFGPP-PPGGP--GAYGPPPTGFPP 453
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -1
Query: 338 PXRGTHXPXSPPKXPFRTXLXTGGPQXGXXXAPPXGAPPXPXXXGPXLXG 189
P G +PP F GGP G PP G P P GP G
Sbjct: 382 PQSGPPGAFAPPPSAFGAPQGPGGP--GGYGPPPPGGPGAPGSYGPPQGG 429
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 270 GAPXGGXXXPPXGGPXXPXXXGXPXXG 190
G P GG PP GGP P G P G
Sbjct: 404 GGP-GGYGPPPPGGPGAPGSYGPPQGG 429
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 377 PFGXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPG 508
P+G GGG GG+ G GG G +G + G P GPG
Sbjct: 79 PYGRYGGGGYGGYGRYGRYGRYGG--YGGYGGY-GGPGYGGGPG 119
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 377 PFGXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPG 508
P+G GGG GG+ G GG G +G + G P GPG
Sbjct: 79 PYGRYGGGGYGGYGRYGRYGRYGG--YGGYGGY-GGPGYGGGPG 119
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 456 GGXGXXFXGPPPXPXAXGPGXGGXG 530
GG G PPP P A G G GG G
Sbjct: 22 GGGGGCGCAPPPPPPACGCGGGGGG 46
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/88 (28%), Positives = 27/88 (30%)
Frame = -1
Query: 692 GXXPGGKTKXKXXPXXXAPXXGXXXXPXXLPAGXPPGXGXXIPPPXGXPXRGPXXXXPXP 513
G PG T P P P +P G PG PP P P P
Sbjct: 231 GFPPGQPTAGSFPPGPQVPG-SYPSGPADIPQG--PGMPRAFPPGASAPV-APGMPGAFP 286
Query: 512 RXXGRGXXGGXXKXXPXAPXXAPPXXPG 429
G+G G P AP P PG
Sbjct: 287 --PGQGGPGMPGSFPPGAPGPGGPGMPG 312
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 380 FGXLXGGGXGGFFGXF--XXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
+G GGG GG+ G + G GG G WG G G G G G
Sbjct: 241 YGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWG---GPQQQQGGGGWGQQG 287
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 380 FGXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
+G GGG GG+ G G G G G + G G G G G
Sbjct: 203 YGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQG 250
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 380 FGXLXGGGXGGFFGXF--XXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
+G GGG GG+ G + G GG G WG G G G G G
Sbjct: 203 YGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWG---GPQQQQGGGGWGQQG 249
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 380 FGXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
+G GGG GG+ G G G G G + G G G G G
Sbjct: 241 YGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQG 288
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 380 FGXLXGGGXGGFFGXF--XXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
+G GGG GG+ G + G GG G WG G G G G G
Sbjct: 241 YGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWG---GPQQQQGGGGWGQQG 287
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 614 PXXLPAGXPPGXGXXIPPPXGXPXRGPXXXXP 519
P LP G PP PPP G P P P
Sbjct: 691 PAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPP 722
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +2
Query: 383 GXLXGGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
G GG GG+ G G GG G G + G G G G G
Sbjct: 14 GSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGG 60
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Frame = +2
Query: 395 GGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPP------XXXGPGXGGXG 523
GGG G +G G G G G F G P GPG GG G
Sbjct: 50 GGGPGSNYGPGRGGFGGNGGFGGNGGFGGGPSYGGRGGFGGGPGFGGRG 98
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 395 GGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGGXG 523
GGG G+ G G G WG G G G GG G
Sbjct: 58 GGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGG 100
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 395 GGGXGGFFGXFXXGXXGGXXXGXWGXFXGXPPXXXGPGXGG 517
GGG GG G F G G +G PP P GG
Sbjct: 486 GGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSGPDPDFGG 526
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/105 (22%), Positives = 29/105 (27%), Gaps = 4/105 (3%)
Frame = -1
Query: 566 PPPXGXPXRGPXXXXPXPRXXGRGXXG---GXXKXXPXAPXXAPPXXPGKXXQKTXXXXX 396
P P G P GP P+ G G + P P P P + + +
Sbjct: 170 PQPSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSP 229
Query: 395 XK-GXQXGXQKGXXPXXXGXPXRGTHXPXSPPKXPFRTXLXTGGP 264
P G P T P PP P R GP
Sbjct: 230 GPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGP 274
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = -1
Query: 602 PAGXPP--GXGXXIPPPXGXP--XRGPXXXXPXPRXXGRGXXGGXXKXXPXAPXXAPPXX 435
P G PP G PPP G P GP P P G G P P PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGP---PPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 434 P 432
P
Sbjct: 773 P 773
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +1
Query: 457 GALGXLXWXPPXXPRPXXRGXGXXXXGPRXGXPXGGGIXXPNPGGXPAGKXXGXXXXPXX 636
G L + PP P P G GP P GG P P P G G P
Sbjct: 733 GGLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Query: 637 G 639
G
Sbjct: 791 G 791
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/76 (32%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = -3
Query: 654 PXXXGPXPGXXPGXXXFAGXXPPRVXXXDXXXXXXXXTGAXXXXPXPPXPG--PXXXGGX 481
P GP P PG G PP TG P PP PG P GG
Sbjct: 708 PITGGPPP--PPGLPPITGGPPP----PPPPGGLPPITGGP---PPPPPPGGLPPISGGP 758
Query: 480 PXKXPQXPXXXPPXXP 433
P P P PP P
Sbjct: 759 PP-PPPPPGGCPPPPP 773
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -2
Query: 331 GGHTXPXPPQX--TPSEPXXXRGGPKXGXXXPPPXG 230
GG P PP P P GG K G PPP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = -1
Query: 602 PAGXPP--GXGXXIPPPXGXP--XRGPXXXXPXPRXXGRGXXGGXXKXXPXAPXXAPPXX 435
P G PP G PPP G P GP P P G G P P PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGP---PPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 434 P 432
P
Sbjct: 773 P 773
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +1
Query: 457 GALGXLXWXPPXXPRPXXRGXGXXXXGPRXGXPXGGGIXXPNPGGXPAGKXXGXXXXPXX 636
G L + PP P P G GP P GG P P P G G P
Sbjct: 733 GGLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Query: 637 G 639
G
Sbjct: 791 G 791
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/76 (32%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = -3
Query: 654 PXXXGPXPGXXPGXXXFAGXXPPRVXXXDXXXXXXXXTGAXXXXPXPPXPG--PXXXGGX 481
P GP P PG G PP TG P PP PG P GG
Sbjct: 708 PITGGPPP--PPGLPPITGGPPP----PPPPGGLPPITGGP---PPPPPPGGLPPISGGP 758
Query: 480 PXKXPQXPXXXPPXXP 433
P P P PP P
Sbjct: 759 PP-PPPPPGGCPPPPP 773
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -2
Query: 331 GGHTXPXPPQX--TPSEPXXXRGGPKXGXXXPPPXG 230
GG P PP P P GG K G PPP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +2
Query: 395 GGGXGGFFGXFXXGXXGGXXX---GXWGXFXGXPPXXXGPGXGGXG 523
GGG GG+ G GG G WG G G G GG G
Sbjct: 221 GGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYG 266
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = -1
Query: 602 PAGXPP--GXGXXIPPPXGXP--XRGPXXXXPXPRXXGRGXXGGXXKXXPXAPXXAPPXX 435
P G PP G PPP G P GP P P G G P P PP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGP---PPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 434 P 432
P
Sbjct: 356 P 356
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +1
Query: 457 GALGXLXWXPPXXPRPXXRGXGXXXXGPRXGXPXGGGIXXPNPGGXPAGKXXGXXXXPXX 636
G L + PP P P G GP P GG P P P G G P
Sbjct: 316 GGLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Query: 637 G 639
G
Sbjct: 374 G 374
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/76 (32%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = -3
Query: 654 PXXXGPXPGXXPGXXXFAGXXPPRVXXXDXXXXXXXXTGAXXXXPXPPXPG--PXXXGGX 481
P GP P PG G PP TG P PP PG P GG
Sbjct: 291 PITGGPPP--PPGLPPITGGPPP----PPPPGGLPPITGGP---PPPPPPGGLPPISGGP 341
Query: 480 PXKXPQXPXXXPPXXP 433
P P P PP P
Sbjct: 342 PP-PPPPPGGCPPPPP 356
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -2
Query: 331 GGHTXPXPPQX--TPSEPXXXRGGPKXGXXXPPPXG 230
GG P PP P P GG K G PPP G
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 441 GGGXXGGXGXXFXGPPPXPXAXGPGXGG 524
G G GG G PPP P G G GG
Sbjct: 32 GCGGGGGGGGCCAPPPPPPVCGGCGCGG 59
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = -1
Query: 605 LPAGXPP-GXGXXIPP-PXGX-PXRGPXXXXPXPRXXGRGXXGGXXKXXPXAPXXAPP 441
+P+G PP +PP P G P RG P PR G P P PP
Sbjct: 129 MPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPP 186
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = -1
Query: 683 PGGKTKXKXXPXXXAPXXGXXXXPXXLPAGXPPGXGXXIPPPXGXPXRGPXXXXPXP 513
P G + P P G P PPG PPP GP P P
Sbjct: 146 PSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMP 202
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = -1
Query: 605 LPAGXPP-GXGXXIPP-PXGX-PXRGPXXXXPXPRXXGRGXXGGXXKXXPXAPXXAPP 441
+P+G PP +PP P G P RG P PR G P P PP
Sbjct: 129 MPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPP 186
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = -1
Query: 683 PGGKTKXKXXPXXXAPXXGXXXXPXXLPAGXPPGXGXXIPPPXGXPXRGPXXXXPXP 513
P G + P P G P PPG PPP GP P P
Sbjct: 146 PSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMP 202
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Frame = -3
Query: 654 PXXXGPXPGXXPGXXXFAGXXPPRVXXXDXXXXXXXXTGAXXXXPXPPXPGPXXXGG-XP 478
P P PG PG G PP P PP PG GG P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPP-------PPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
Query: 477 XKXPQXPXXXPPXXP 433
P+ P P P
Sbjct: 350 PPPPRYPSAGPGMYP 364
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -1
Query: 590 PPGXGXXIP-PPXGXPXRGPXXXXPXPRXXGRGXXGGXXKXXPXAPXXAPPXXPG 429
PPG G P PP G G P PR G G P + APP G
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP--GMYPPPPPSRPPAPPSGHG 379
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Frame = -3
Query: 654 PXXXGPXPGXXPGXXXFAGXXPPRVXXXDXXXXXXXXTGAXXXXPXPPXPGPXXXGG-XP 478
P P PG PG G PP P PP PG GG P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPP-------PPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
Query: 477 XKXPQXPXXXPPXXP 433
P+ P P P
Sbjct: 360 PPPPRYPSAGPGMYP 374
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -1
Query: 590 PPGXGXXIP-PPXGXPXRGPXXXXPXPRXXGRGXXGGXXKXXPXAPXXAPPXXPG 429
PPG G P PP G G P PR G G P + APP G
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP--GMYPPPPPSRPPAPPSGHG 389
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -1
Query: 614 PXXLPAGXPPGXGXXIPPPXGXPXRGPXXXXPXPRXXGRGXXGGXXKXXPXAPXXAPPXX 435
P PA PPG PP G P P P R GG P P P
Sbjct: 765 PVPRPAPAPPGGRQAPMPPRGGPGAPP---PPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Query: 434 P 432
P
Sbjct: 822 P 822
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = -3
Query: 540 GAXXXXPXPPXP-GPXXXGGXPXKXPQXPXXXPPXXP 433
GA P PP P GP G P K Q PP P
Sbjct: 221 GAPPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLP 257
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -1
Query: 614 PXXLPAGXPPGXGXXIPPPXGXPXRGPXXXXPXPRXXGRGXXGGXXKXXPXAPXXAPPXX 435
P PA PPG PP G P P P R GG P P P
Sbjct: 765 PVPRPAPAPPGGRQAPMPPRGGPGAPP---PPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Query: 434 P 432
P
Sbjct: 822 P 822
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -1
Query: 329 GTHXPXSPPKXPFRTXLXTGGPQXGXXXAPPXGAPPXPXXXGPXLXG 189
GT+ P PP P +G P P G PP P L G
Sbjct: 555 GTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,808,547
Number of Sequences: 27780
Number of extensions: 272424
Number of successful extensions: 1423
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -