Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_D14
         (935 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06505-1|AAA36157.1|  165|Homo sapiens ribosomal protein L12 pro...    36   0.21 
BC105603-1|AAI05604.1|  165|Homo sapiens ribosomal protein L12 p...    36   0.21 
BC094831-1|AAH94831.1|  165|Homo sapiens ribosomal protein L12 p...    36   0.21 
BC059950-1|AAH59950.1|  132|Homo sapiens RPL12 protein protein.        36   0.21 
BC050644-1|AAH50644.1|  165|Homo sapiens ribosomal protein L12 p...    36   0.21 
AL445222-15|CAH72929.1|  165|Homo sapiens ribosomal protein L12 ...    36   0.21 
AB209471-1|BAD92708.1|  197|Homo sapiens ribosomal protein L12 v...    36   0.21 
AL021366-3|CAA16156.1|  165|Homo sapiens cICK0721Q.2 (60S Riboso...    34   0.85 

>L06505-1|AAA36157.1|  165|Homo sapiens ribosomal protein L12
           protein.
          Length = 165

 Score = 35.9 bits (79), Expect = 0.21
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 68  VEGRPPHDLIDDINSGAL 121
           V+GR PHD+IDDINSGA+
Sbjct: 143 VDGRHPHDIIDDINSGAV 160


>BC105603-1|AAI05604.1|  165|Homo sapiens ribosomal protein L12
           protein.
          Length = 165

 Score = 35.9 bits (79), Expect = 0.21
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 68  VEGRPPHDLIDDINSGAL 121
           V+GR PHD+IDDINSGA+
Sbjct: 143 VDGRHPHDIIDDINSGAV 160


>BC094831-1|AAH94831.1|  165|Homo sapiens ribosomal protein L12
           protein.
          Length = 165

 Score = 35.9 bits (79), Expect = 0.21
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 68  VEGRPPHDLIDDINSGAL 121
           V+GR PHD+IDDINSGA+
Sbjct: 143 VDGRHPHDIIDDINSGAV 160


>BC059950-1|AAH59950.1|  132|Homo sapiens RPL12 protein protein.
          Length = 132

 Score = 35.9 bits (79), Expect = 0.21
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 68  VEGRPPHDLIDDINSGAL 121
           V+GR PHD+IDDINSGA+
Sbjct: 110 VDGRHPHDIIDDINSGAV 127


>BC050644-1|AAH50644.1|  165|Homo sapiens ribosomal protein L12
           protein.
          Length = 165

 Score = 35.9 bits (79), Expect = 0.21
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 68  VEGRPPHDLIDDINSGAL 121
           V+GR PHD+IDDINSGA+
Sbjct: 143 VDGRHPHDIIDDINSGAV 160


>AL445222-15|CAH72929.1|  165|Homo sapiens ribosomal protein L12
           protein.
          Length = 165

 Score = 35.9 bits (79), Expect = 0.21
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 68  VEGRPPHDLIDDINSGAL 121
           V+GR PHD+IDDINSGA+
Sbjct: 143 VDGRHPHDIIDDINSGAV 160


>AB209471-1|BAD92708.1|  197|Homo sapiens ribosomal protein L12
           variant protein.
          Length = 197

 Score = 35.9 bits (79), Expect = 0.21
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 68  VEGRPPHDLIDDINSGAL 121
           V+GR PHD+IDDINSGA+
Sbjct: 175 VDGRHPHDIIDDINSGAV 192


>AL021366-3|CAA16156.1|  165|Homo sapiens cICK0721Q.2 (60S Ribosomal
           Protein L12 LIKE protein) protein.
          Length = 165

 Score = 33.9 bits (74), Expect = 0.85
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +2

Query: 68  VEGRPPHDLIDDINSGAL 121
           V+G  PHD+IDDINSGA+
Sbjct: 143 VDGHHPHDIIDDINSGAV 160


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,888,695
Number of Sequences: 237096
Number of extensions: 1371770
Number of successful extensions: 5681
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5681
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12270013262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)