Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_D14
         (935 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p pro...    31   3.0  
AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p pro...    31   3.0  
AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC...    31   3.0  
AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB...    31   3.0  
AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA...    31   3.0  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   6.9  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   6.9  

>BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p
           protein.
          Length = 307

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 29  RESLRFYSQLDVLVEGRPPHDLIDDINSGALTI 127
           +E L     +   V+G+ PHD+ID++N G++ +
Sbjct: 272 KEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEV 304


>AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p
           protein.
          Length = 165

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 29  RESLRFYSQLDVLVEGRPPHDLIDDINSGALTI 127
           +E L     +   V+G+ PHD+ID++N G++ +
Sbjct: 130 KEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEV 162


>AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC,
           isoform C protein.
          Length = 165

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 29  RESLRFYSQLDVLVEGRPPHDLIDDINSGALTI 127
           +E L     +   V+G+ PHD+ID++N G++ +
Sbjct: 130 KEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEV 162


>AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB,
           isoform B protein.
          Length = 165

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 29  RESLRFYSQLDVLVEGRPPHDLIDDINSGALTI 127
           +E L     +   V+G+ PHD+ID++N G++ +
Sbjct: 130 KEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEV 162


>AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA,
           isoform A protein.
          Length = 165

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 29  RESLRFYSQLDVLVEGRPPHDLIDDINSGALTI 127
           +E L     +   V+G+ PHD+ID++N G++ +
Sbjct: 130 KEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEV 162


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 452 ESANARGXAVCVXGALPLPRSLTRCARSFGCG 547
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 452 ESANARGXAVCVXGALPLPRSLTRCARSFGCG 547
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,840,458
Number of Sequences: 53049
Number of extensions: 392230
Number of successful extensions: 621
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4628299878
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)