Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_D11
(918 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0610 + 4564016-4564018,4564166-4564243,4564764-4564788,456... 225 4e-59
04_04_0882 + 29061504-29061512,29061852-29061964,29062371-290623... 218 4e-57
09_04_0593 - 18825741-18826702,18826994-18827875,18828687-188287... 208 4e-54
01_01_0293 - 2399945-2400395,2400927-2401057,2401184-2401305,240... 158 7e-39
01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667 92 6e-19
10_07_0132 + 13263577-13263732,13265391-13265456,13265607-132657... 29 6.8
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284... 29 6.8
12_02_0820 + 23437811-23440230,23440336-23440534 28 9.0
>02_01_0610 +
4564016-4564018,4564166-4564243,4564764-4564788,
4564870-4564902,4565034-4565155,4565230-4565360,
4565509-4565732,4565824-4566065,4566268-4566357
Length = 315
Score = 225 bits (550), Expect = 4e-59
Identities = 99/182 (54%), Positives = 137/182 (75%)
Frame = +3
Query: 222 FNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKRLTH 401
F TYRCY S + ++ +E G KIIMPPSAL++L L+IEYPM+F++ N ++R +H
Sbjct: 13 FEQTYRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSH 69
Query: 402 CGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPK 581
CGVLEF+A+EG +Y+P+WMM NL+L EG ++ I++ +LP T+ K QP + DFLDI+NPK
Sbjct: 70 CGVLEFIAEEGMIYMPYWMMQNLLLTEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPK 129
Query: 582 AVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKE 761
A+LE LRN+SCLTTGD I + YN+K Y + ++ETKP NA+ IIE D V+FAPP+ YKE
Sbjct: 130 AILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKE 189
Query: 762 QD 767
+
Sbjct: 190 PE 191
>04_04_0882 +
29061504-29061512,29061852-29061964,29062371-29062398,
29062690-29062734,29063379-29063456,29063573-29063597,
29063690-29063722,29063793-29063914,29064015-29064145,
29064242-29064468,29065175-29065431,29065859-29065945
Length = 384
Score = 218 bits (533), Expect = 4e-57
Identities = 99/199 (49%), Positives = 144/199 (72%)
Frame = +3
Query: 174 EMFQFGFNMFHEISRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 353
+MF G+ +H + F TYRCY S ++ +E G K+IMPPSAL++L L+IEY
Sbjct: 64 KMFYAGYG-YHGSN--FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEY 117
Query: 354 PMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFS 533
PM+F+L N ++R++HCGVLEFVA+EG + +P+WMM N++L+EG +++++ +LP T+
Sbjct: 118 PMLFELHNDATQRISHCGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVRVKNTTLPKGTYV 177
Query: 534 KFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIII 713
K QP + DFLDI+NPKA+LE LR SC+TTGD I + YN+K Y + ++ETKP +AV II
Sbjct: 178 KLQPHTTDFLDISNPKAILEKTLRKLSCITTGDSIMVAYNNKQYYIDIVETKPASAVSII 237
Query: 714 ECDMNVEFAPPVGYKEQDH 770
E D V+FAPP+ YKE ++
Sbjct: 238 ETDCEVDFAPPLDYKEPEN 256
>09_04_0593 - 18825741-18826702,18826994-18827875,18828687-18828775,
18828942-18829080,18829405-18829531,18829629-18829838
Length = 802
Score = 208 bits (509), Expect = 4e-54
Identities = 100/200 (50%), Positives = 137/200 (68%), Gaps = 4/200 (2%)
Frame = +3
Query: 192 FNMFH-EISRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFK 368
F+ FH R F TYRCYS + + +E G K+IMP SAL +L L+I+YPM+F+
Sbjct: 478 FSSFHGHGGRGFEQTYRCYSAAAF---NKPQLEGGDKVIMPASALHRLASLHIDYPMLFE 534
Query: 369 LTNK---KSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKF 539
L++ + R+THCGVLEFVADEG V +P WMM + L++G L+ + S SLP +++K
Sbjct: 535 LSHHGDAAAHRVTHCGVLEFVADEGTVIMPRWMMRGMRLDDGGLVVVRSASLPKGSYAKL 594
Query: 540 QPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIEC 719
QP + DFLD NPKAVLE LR+F+CLTTGD I + YN+K + + ++ETKP +AV IIE
Sbjct: 595 QPHTGDFLDTANPKAVLEKTLRSFTCLTTGDTIMVAYNNKEFLIDIVETKPASAVCIIET 654
Query: 720 DMNVEFAPPVGYKEQDHVSR 779
D V+FAPP+ YKE + V +
Sbjct: 655 DCEVDFAPPLDYKEPEKVQQ 674
>01_01_0293 -
2399945-2400395,2400927-2401057,2401184-2401305,
2401423-2401455,2401556-2401661,2401882-2401884
Length = 281
Score = 158 bits (383), Expect = 7e-39
Identities = 76/175 (43%), Positives = 114/175 (65%)
Frame = +3
Query: 213 SRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKR 392
S F YRC +S+L ++++ + G ++ MP SAL++L L+IEYPM F++ N + +
Sbjct: 11 SATFAQLYRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATTLQ 67
Query: 393 LTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDIT 572
++CGVLEF ADEG +++P MM +L L E L+ + S S+P ATF K QP + DF ++
Sbjct: 68 TSYCGVLEFTADEGFIHIPTMMMEHLGLRENDLVLLRSTSIPKATFIKLQPHTSDFHKLS 127
Query: 573 NPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEF 737
P+ +LE RN+ CLTTG+ IA+ + Y L V+ET+P +AV +IE D VEF
Sbjct: 128 EPRYLLEYNFRNYFCLTTGETIAVAAGDRFYYLDVVETRPADAVCVIETDCEVEF 182
>01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667
Length = 569
Score = 91.9 bits (218), Expect = 6e-19
Identities = 58/168 (34%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Frame = +3
Query: 291 GGKIIMPPSALEQLTRLNI--EYPMIFKLTNKKSK-----------RLTHCGVLEFVADE 431
G KI +PPS+ ++L+ + PM F+L+ + T CGVLEF A E
Sbjct: 91 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDSVPGAPQDNDADEATCCGVLEFTARE 150
Query: 432 GRVYLPHWMMANLVLEEGA---LIQIESVSLPVATFSKFQPLSEDFLDITNPKAVLENCL 602
G L + NL + LI++ VSLP T++K +P F D+ N +AVLE L
Sbjct: 151 GSAELTPHVWNNLFRGDSPDVPLIEVRYVSLPKGTYAKLKPEGVGFSDLPNHRAVLETAL 210
Query: 603 RNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPP 746
RN + L+ D + + Y Y+L VLE KP ++V ++E D+ V+ P
Sbjct: 211 RNHATLSENDFVVVNYGQLQYKLKVLELKPASSVSVLETDVEVDIEGP 258
>10_07_0132 +
13263577-13263732,13265391-13265456,13265607-13265705,
13267020-13267084,13267210-13267294,13267389-13267422,
13267539-13267642,13268085-13268408,13269090-13269605
Length = 482
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -3
Query: 388 FDFLFVNLNIIGYSILSLVSCSNADGGIIILPPLSTSCLSFPG 260
+D LF NI +++ S+ + + A G+++LP +S +S G
Sbjct: 438 WDELFGEGNIPAFAMASVFAAAAAAAGVVLLPKVSVRSVSMAG 480
>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
27829243-27829449,27829611-27829704,27829806-27829870,
27829946-27830398,27830467-27830760,27830837-27831295,
27831367-27831588,27831755-27831968,27832039-27832494,
27833280-27833389,27833468-27833644,27833758-27833979,
27834048-27834167,27834274-27834383,27834552-27834607,
27835252-27835440,27835602-27835775,27836066-27836281,
27837066-27837106,27837971-27837986,27838330-27838415,
27838737-27838910,27839093-27839149,27839720-27840064,
27840175-27840216,27840377-27840496,27840575-27840724,
27840830-27841534,27841609-27841954,27842978-27843080,
27844817-27844860,27845905-27846101,27846322-27846344,
27846802-27847122,27847406-27847579,27847843-27848047,
27848817-27848880,27850097-27850278,27850291-27850350,
27850688-27850748,27851249-27851313,27851491-27851569,
27851656-27852021,27852442-27852790,27852887-27852989,
27853103-27853373,27854296-27854405,27854515-27854652
Length = 3364
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 600 LRNFSCLTTGDVIAIKYNSKV--YELCVLETKPGNAVIIIECDMNV 731
L+NFSC + DVI+ Y SK+ E+ + A+I IE +++
Sbjct: 1149 LQNFSCFPSDDVISSGYGSKIENIEMSSSGKRTEYAIICIELALSL 1194
>12_02_0820 + 23437811-23440230,23440336-23440534
Length = 872
Score = 28.3 bits (60), Expect = 9.0
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -3
Query: 691 GLVSRTHSS*TFELYFIAMTSPVVKHEKLRKQFSNTAFGFVMSKKSSDKGWNLENVATGS 512
GLV+RT L + + K + ++ + AFG ++ S+DK L NVA +
Sbjct: 354 GLVARTVGDDIVPLVMPFVEENITKPDWRHREAATYAFGSILEGPSADKLAPLVNVAL-N 412
Query: 511 DTLSICIKAPSSRTR 467
LS + PS+ +
Sbjct: 413 FMLSALVNDPSNHVK 427
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,319,286
Number of Sequences: 37544
Number of extensions: 438156
Number of successful extensions: 916
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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