Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_D11
         (918 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69635-3|CAA93460.1|  342|Caenorhabditis elegans Hypothetical pr...   189   3e-48
Z69635-4|CAB54216.1|  336|Caenorhabditis elegans Hypothetical pr...   186   1e-47
Z81493-10|CAB04044.2|  508|Caenorhabditis elegans Hypothetical p...    29   6.2  

>Z69635-3|CAA93460.1|  342|Caenorhabditis elegans Hypothetical
           protein F19B6.2a protein.
          Length = 342

 Score =  189 bits (460), Expect = 3e-48
 Identities = 92/184 (50%), Positives = 124/184 (67%), Gaps = 3/184 (1%)
 Frame = +3

Query: 222 FNMTYRCYSVSMLPG---NERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKR 392
           ++ T+  Y    LP    ++  ++  GGKI++P SAL  L + NI  PM+FKLTN   +R
Sbjct: 21  YDQTFVVYGPVFLPNATQSKISEINYGGKILLPSSALNLLMQYNIPMPMLFKLTNMAVQR 80

Query: 393 LTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDIT 572
           +THCGVLEF A EG+  LP WMM  L L++G  I+IES +LP ATF+K +P+S +FL+IT
Sbjct: 81  VTHCGVLEFSAPEGQAILPLWMMQQLGLDDGDTIRIESATLPKATFAKLKPMSLEFLNIT 140

Query: 573 NPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVG 752
           NPKAVLE  LR ++CLT  D I   Y  +  E  V++ KP N+V IIECD+N++F PP G
Sbjct: 141 NPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVVDLKPANSVCIIECDVNLDFDPPEG 200

Query: 753 YKEQ 764
           Y EQ
Sbjct: 201 YVEQ 204


>Z69635-4|CAB54216.1|  336|Caenorhabditis elegans Hypothetical
           protein F19B6.2b protein.
          Length = 336

 Score =  186 bits (454), Expect = 1e-47
 Identities = 88/162 (54%), Positives = 115/162 (70%)
 Frame = +3

Query: 279 DVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWM 458
           ++  GGKI++P SAL  L + NI  PM+FKLTN   +R+THCGVLEF A EG+  LP WM
Sbjct: 37  EINYGGKILLPSSALNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLWM 96

Query: 459 MANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVI 638
           M  L L++G  I+IES +LP ATF+K +P+S +FL+ITNPKAVLE  LR ++CLT  D I
Sbjct: 97  MQQLGLDDGDTIRIESATLPKATFAKLKPMSLEFLNITNPKAVLEVELRKYACLTKNDRI 156

Query: 639 AIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKEQ 764
              Y  +  E  V++ KP N+V IIECD+N++F PP GY EQ
Sbjct: 157 PTSYAGQTLEFLVVDLKPANSVCIIECDVNLDFDPPEGYVEQ 198


>Z81493-10|CAB04044.2|  508|Caenorhabditis elegans Hypothetical
           protein F01D5.9 protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 351 YPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEG 485
           YPM+  LT + +K++     L   + E  ++LP W+   L+L  G
Sbjct: 87  YPMVIVLTPEANKKVLESNALINKSSEYDIFLP-WLGTGLLLASG 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,842,838
Number of Sequences: 27780
Number of extensions: 417641
Number of successful extensions: 1017
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)