Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_D05
         (961 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052101-1|AAK93525.1|  607|Drosophila melanogaster SD04973p pro...    32   1.3  
AE013599-3005|AAF57474.1|  567|Drosophila melanogaster CG8929-PC...    32   1.3  
AE013599-3004|AAF57475.2|  607|Drosophila melanogaster CG8929-PB...    32   1.3  
AE013599-3003|AAF57473.2|  607|Drosophila melanogaster CG8929-PA...    32   1.3  
Y08968-1|CAA70165.1|  111|Drosophila melanogaster Tctex protein ...    31   3.1  
AY069608-1|AAL39753.1|  111|Drosophila melanogaster LD36705p pro...    31   3.1  
AF123058-1|AAD30033.1|  111|Drosophila melanogaster dynein light...    31   3.1  
AE014297-2495|AAF55532.1|  111|Drosophila melanogaster CG12363-P...    31   3.1  

>AY052101-1|AAK93525.1|  607|Drosophila melanogaster SD04973p
           protein.
          Length = 607

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -2

Query: 207 RVRASMSAMTTSNESCCVASSNFTHRSFSICAPFDPIAQRIHKRTIRRPPTRLDSN 40
           R R++ S  T+S++SC + S +  HRS S      P   R H R+   PP   +S+
Sbjct: 261 RSRSNSSMSTSSDDSCSLCSPSHRHRSRSRGPRSPPPKPRGHYRSGAPPPPPSESH 316


>AE013599-3005|AAF57474.1|  567|Drosophila melanogaster CG8929-PC,
           isoform C protein.
          Length = 567

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -2

Query: 207 RVRASMSAMTTSNESCCVASSNFTHRSFSICAPFDPIAQRIHKRTIRRPPTRLDSN 40
           R R++ S  T+S++SC + S +  HRS S      P   R H R+   PP   +S+
Sbjct: 221 RSRSNSSMSTSSDDSCSLCSPSHRHRSRSRGPRSPPPKPRGHYRSGAPPPPPSESH 276


>AE013599-3004|AAF57475.2|  607|Drosophila melanogaster CG8929-PB,
           isoform B protein.
          Length = 607

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -2

Query: 207 RVRASMSAMTTSNESCCVASSNFTHRSFSICAPFDPIAQRIHKRTIRRPPTRLDSN 40
           R R++ S  T+S++SC + S +  HRS S      P   R H R+   PP   +S+
Sbjct: 261 RSRSNSSMSTSSDDSCSLCSPSHRHRSRSRGPRSPPPKPRGHYRSGAPPPPPSESH 316


>AE013599-3003|AAF57473.2|  607|Drosophila melanogaster CG8929-PA,
           isoform A protein.
          Length = 607

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -2

Query: 207 RVRASMSAMTTSNESCCVASSNFTHRSFSICAPFDPIAQRIHKRTIRRPPTRLDSN 40
           R R++ S  T+S++SC + S +  HRS S      P   R H R+   PP   +S+
Sbjct: 261 RSRSNSSMSTSSDDSCSLCSPSHRHRSRSRGPRSPPPKPRGHYRSGAPPPPPSESH 316


>Y08968-1|CAA70165.1|  111|Drosophila melanogaster Tctex protein
           protein.
          Length = 111

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 385 CIAVLVSTKFSKKYVISSVVHNDNIGNILLADCRYYNNDT 504
           C+ VL   +   KY++++++   N   +  A   Y+NNDT
Sbjct: 48  CLTVLTKEQKPYKYIVTAMIMQKNGAGLHTASSCYWNNDT 87


>AY069608-1|AAL39753.1|  111|Drosophila melanogaster LD36705p
           protein.
          Length = 111

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 385 CIAVLVSTKFSKKYVISSVVHNDNIGNILLADCRYYNNDT 504
           C+ VL   +   KY++++++   N   +  A   Y+NNDT
Sbjct: 48  CLTVLTKEQKPYKYIVTAMIMQKNGAGLHTASSCYWNNDT 87


>AF123058-1|AAD30033.1|  111|Drosophila melanogaster dynein light
           chain subunit protein.
          Length = 111

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 385 CIAVLVSTKFSKKYVISSVVHNDNIGNILLADCRYYNNDT 504
           C+ VL   +   KY++++++   N   +  A   Y+NNDT
Sbjct: 48  CLTVLTKEQKPYKYIVTAMIMQKNGAGLHTASSCYWNNDT 87


>AE014297-2495|AAF55532.1|  111|Drosophila melanogaster CG12363-PA
           protein.
          Length = 111

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 385 CIAVLVSTKFSKKYVISSVVHNDNIGNILLADCRYYNNDT 504
           C+ VL   +   KY++++++   N   +  A   Y+NNDT
Sbjct: 48  CLTVLTKEQKPYKYIVTAMIMQKNGAGLHTASSCYWNNDT 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,836,699
Number of Sequences: 53049
Number of extensions: 418572
Number of successful extensions: 942
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4792133502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)