Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_D03
(914 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 69 4e-12
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 65 6e-11
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 65 8e-11
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 60 2e-09
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 60 2e-09
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 58 1e-08
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 56 5e-08
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 55 9e-08
04_01_0350 - 4610444-4610668,4612181-4612969 54 2e-07
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 51 1e-06
10_01_0065 + 845447-846187,846969-847193 51 1e-06
10_01_0066 + 848523-849269,849520-849741 50 3e-06
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 49 5e-06
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 45 7e-05
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 44 2e-04
09_02_0012 + 2965797-2966714,2966756-2967011,2967051-2967147,296... 29 3.9
01_02_0107 - 11197013-11197244,11197384-11197514 29 5.2
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 28 9.0
04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911 28 9.0
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 28 9.0
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 69.3 bits (162), Expect = 4e-12
Identities = 34/78 (43%), Positives = 44/78 (56%)
Frame = +2
Query: 380 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 559
L G +P + LGT P + V A+ GYR ID A Y NEK IG A+K D+G
Sbjct: 7 LNTGAKIPSVGLGTWQAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKEIGVALKKVFDEG 66
Query: 560 TVRRDELFIMGKLWSTFH 613
V+R+++FI KLW T H
Sbjct: 67 IVKREDIFITSKLWCTNH 84
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 65.3 bits (152), Expect = 6e-11
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = +2
Query: 380 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 559
L G +P + LGT P + + V A+ GYR ID A +Y NE +G A+K ++G
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGDAVYAAVKAGYRHIDCARMYKNENEVGIALKKLFEEG 66
Query: 560 TVRRDELFIMGKLWSTFH 613
V+R++LFI KLW H
Sbjct: 67 VVKREDLFITSKLWCDCH 84
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 64.9 bits (151), Expect = 8e-11
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 380 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEK-LIGKAIKNKIDD 556
L G +P + LGT + ++V A+ GYR ID A +Y NE+ +IG A+K DD
Sbjct: 7 LNTGARIPSVGLGTYKAGTGVVADVVSAAVKAGYRHIDCAPLYKNEQEVIGGALKKLFDD 66
Query: 557 GTVRRDELFIMGKLW 601
G V+R++LFI K+W
Sbjct: 67 GVVKREDLFITSKIW 81
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = +2
Query: 380 LRDGTFMPVIALGTALLP------PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 541
LR G MP++ +GTA P P + V AID GYR DTA YG E +G+A+
Sbjct: 21 LRSGKPMPLVGMGTASFPLDAPQLPATVRDAVLRAIDAGYRHFDTAAAYGTEAPLGEAVL 80
Query: 542 NKIDDGTV-RRDELFIMGKLW 601
+ G V RD+L+I KLW
Sbjct: 81 EAVRAGMVASRDDLYITSKLW 101
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +2
Query: 368 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 547
A L L G MP + LG + +++ +A+ +GYR D A Y NE +G A+
Sbjct: 11 AALALSSGHTMPSVGLGVWRMDSPAIRDLIHSALRIGYRHFDCAADYQNEAEVGDALAEA 70
Query: 548 IDDGTVRRDELFIMGKLWSTFH 613
G V+R++LFI KLW++ H
Sbjct: 71 FQTGLVKREDLFITTKLWNSDH 92
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 58.0 bits (134), Expect = 1e-08
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Frame = +2
Query: 380 LRDGTFMPVIALGTALLP-----PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 544
L G MP + +GTA P P ++V AI+ GYR DTA +Y E ++G A+
Sbjct: 6 LSSGKPMPRVGMGTASFPLGATDPSTVKDVVLRAIEAGYRHFDTAAVYQTEAILGDAVAE 65
Query: 545 KIDDGTV-RRDELFIMGKLW 601
+ G V RDEL+I KLW
Sbjct: 66 AVRAGLVASRDELYITSKLW 85
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 55.6 bits (128), Expect = 5e-08
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +2
Query: 389 GTFMPVIALGTALLPP---RLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 559
G +P + LGTA L + A+++GYR IDTA +YG+E+++G+A+ G
Sbjct: 25 GRAVPAVGLGTASLRSVGEESFRGALLAALEVGYRHIDTASVYGSERVVGEAVAGAARRG 84
Query: 560 TVR-RDELFIMGKLWSTFHRTDLV 628
+ R+E+F+ K+W T DLV
Sbjct: 85 VIACREEVFVTTKVWCTQCHPDLV 108
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 54.8 bits (126), Expect = 9e-08
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +2
Query: 368 ATLKLRDGTFMPVIALGTALLP--PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 541
A L+ D MP + +G A P P T + V A++ G+R DTA +Y E +G+AI
Sbjct: 8 AVLRHGDARPMPAVGMGVAEYPSTPERTRDAVLAALEAGFRHFDTASLYRTEAPLGEAIA 67
Query: 542 NKIDDGTV-RRDELFIMGKLWSTFHRTDLV 628
G + R+E F+ KLW T DLV
Sbjct: 68 EATRRGLLASREEAFVTTKLWCTQCHPDLV 97
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 365 VATLKLRDGTFMPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 541
V + L G MPV+ GT + PP + A+ +GYR +DTA +YG E +G A+
Sbjct: 20 VPCVTLNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTAAVYGTEGAVGAAVA 79
Query: 542 NKIDDGTV-RRDELFIMGKL 598
+ G V R ELF+ KL
Sbjct: 80 EAVRCGAVASRGELFVTTKL 99
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 51.2 bits (117), Expect = 1e-06
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +2
Query: 353 SVKEVATLKLRDGTFMPVIALGTA---LLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKL 523
+V EVA L+ G MP + +GTA P A+++G+R DTA +YG E
Sbjct: 3 AVPEVA-LRHGAGRPMPAVGVGTADSAATSPETKRGAALAALEVGFRHFDTAALYGTEAP 61
Query: 524 IGKAIKNKIDDGTV-RRDELFIMGKLWST 607
+G+AI G V R+E+F+ KLW T
Sbjct: 62 LGEAIAEATRRGLVASREEVFVTTKLWCT 90
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +2
Query: 398 MPVIALGTALLP---PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTV- 565
MP + +GTA P TT + AI++GYR DTA IY E +G+A+ + G +
Sbjct: 16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIA 75
Query: 566 RRDELFIMGKLW 601
R ++F+ K+W
Sbjct: 76 SRADVFVTSKIW 87
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +2
Query: 398 MPVIALGTALLP---PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTV- 565
MP I +GTA P TT + AI++GYR DTA +Y E + +A+ + G V
Sbjct: 18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVA 77
Query: 566 RRDELFIMGKLW 601
R ++F+ KLW
Sbjct: 78 SRADVFVTSKLW 89
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 49.2 bits (112), Expect = 5e-06
Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +2
Query: 389 GTFMPVIALGTALLPPRLTT--EIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGT 562
G MP + +GTA+ PR V AI+ GYR DTA Y E IG+A + G
Sbjct: 12 GFGMPRVGMGTAVQGPRPEPIRRAVLKAIEAGYRHFDTAAHYETEAPIGEAAAEAVRSGA 71
Query: 563 V-RRDELFIMGKLW-STFHR 616
+ R +LFI KLW S HR
Sbjct: 72 IASRADLFITSKLWCSDAHR 91
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 45.2 bits (102), Expect = 7e-05
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 407 IALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFI 586
+A+ + + ++ + GYR +DTA YG E+ +GK +K ++ G + R +LF+
Sbjct: 69 VAMASKPILSVFANNLIVNHLQAGYRHVDTAAQYGIEQEVGKGLKAAMEAG-INRKDLFV 127
Query: 587 MGKLWST 607
K+W T
Sbjct: 128 TSKIWCT 134
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +2
Query: 380 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 556
L G +P + LGT P + V A+ GYR ID A Y NEK +G A+K ++
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGNAVYAAVKAGYRHIDCASAYNNEKEVGLALKKLFEE 65
>09_02_0012 +
2965797-2966714,2966756-2967011,2967051-2967147,
2967175-2967634,2967804-2968117,2968220-2968235
Length = 686
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 221 VKMESPGSGQRRLDNGKQKRDTGDLTDEQYKTRIAELNEAKLKGSVKEVATLKLRD 388
V E PG G + D G +T + K R A L EA + +KE A K +D
Sbjct: 603 VYAEFPGGGNNDAQEPLLE-DAGKITCTRQKVRAASLEEAVFRTEIKEGAEGKAKD 657
>01_02_0107 - 11197013-11197244,11197384-11197514
Length = 120
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 495 PLIFTATKSS*EKRSRTRLTTAP*GETSFSLWVNCGVHS 611
P+ A +SS ++R R LT+ G +SFS WV+ GV+S
Sbjct: 35 PVKHEARRSSGQQRGRRCLTSRSTGYSSFSSWVS-GVNS 72
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 325 CDPGLILFVCEVSRVSLLFAVVQAPLPAPGRLHLDRS 215
C L+ F+ + L F V P PAP LH R+
Sbjct: 341 CSTSLVHFLIALQPTPLPFGVQLKPAPAPRELHTSRA 377
>04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911
Length = 178
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +2
Query: 452 IVETAIDMGYRAIDTAYIYG---NEKLIGKAIK 541
++ A+ G +DTA IYG NE L+GKA++
Sbjct: 49 LIHHAVAAGVTLLDTADIYGPHANEALLGKALQ 81
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 240 GAGSGAWTTANRSETRETSQTNNIRPGSQN*TKLS*KG 353
G G+GA ++A + TR+T N+ R GS + +S G
Sbjct: 215 GGGAGAGSSAGGAMTRDTEAENDSRSGSDHLDAISAAG 252
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,469,906
Number of Sequences: 37544
Number of extensions: 290864
Number of successful extensions: 1036
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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