Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_D02
         (828 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    40   0.10 
UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1; ...    35   2.9  

>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 159

 Score = 39.5 bits (88), Expect = 0.10
 Identities = 27/75 (36%), Positives = 28/75 (37%)
 Frame = -1

Query: 591 PPPPXXFFXXXXXXFFFXXGGGGXFFXXAXXXGGGKKXXPPPXGFFPPXFXXXXXFXGGG 412
           PPPP          FF   GGGG FF          +  PPP  FF   F        GG
Sbjct: 69  PPPPLKKKKKIFFFFFKKRGGGGGFFFFFPPP----QQNPPPFFFFFLGFFLFFFKKRGG 124

Query: 411 FFLXPPXXKKKKXXF 367
               PP  KKKK  F
Sbjct: 125 GGFSPPPPKKKKIFF 139



 Score = 38.7 bits (86), Expect = 0.18
 Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
 Frame = -1

Query: 591 PPPPXXFFXXXXXXFFFX-XGGGGXFFXXAXXXGGGKKXXPPPXGFFPPXFXXXXXFXGG 415
           PPPP          FFF   GGGG FF         ++  PP   FF   F       GG
Sbjct: 68  PPPPPLKKKKKIFFFFFKKRGGGGGFFFFFPPP---QQNPPPFFFFFLGFFLFFFKKRGG 124

Query: 414 GFFLXPPXXKKK 379
           G F  PP  KKK
Sbjct: 125 GGFSPPPPKKKK 136


>UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 272

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 25/69 (36%), Positives = 26/69 (37%)
 Frame = -1

Query: 582 PXXFFXXXXXXFFFXXGGGGXFFXXAXXXGGGKKXXPPPXGFFPPXFXXXXXFXGGGFFL 403
           P  FF       FF  G  G         GGG+K  PPP    PP         GGG   
Sbjct: 149 PPLFFSPPPKNNFFCVGEKGGGPPPTKYLGGGEKNKPPPP---PPPKKKKRGGGGGG--A 203

Query: 402 XPPXXKKKK 376
            PP  KKKK
Sbjct: 204 PPPQKKKKK 212


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,147,968
Number of Sequences: 1657284
Number of extensions: 13463127
Number of successful extensions: 178133
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68735
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)