Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_C24
(899 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A10.16c |||cytochrome b5 |Schizosaccharomyces pombe|chr 2|... 75 2e-14
SPCC16A11.10c |oca8||cytochrome b5 |Schizosaccharomyces pombe|ch... 68 2e-12
SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces... 38 0.001
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 34 0.024
SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces p... 29 1.2
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 28 1.6
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 28 2.1
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 27 3.6
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 26 6.3
>SPBC29A10.16c |||cytochrome b5 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 74.5 bits (175), Expect = 2e-14
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Frame = +1
Query: 79 MSVHKYTRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEV 258
MSV + E+ +N+K ++I+ VYDV+ F +DHPGG ++++D AG DA++ + ++
Sbjct: 1 MSVKYFEPEEIVEHNNSKDMYMVINGKVYDVSNFADDHPGGLDIMLDYAGQDATKAYQDI 60
Query: 259 GHSEIAIEWRNTFKVGEIV--DEEKLEVKCKQPSAAESAEPLTLGGLLAVYGPPVAMAVL 432
GHS A E +G++ EE+L+ K S PL L L+A+ P A+AV+
Sbjct: 61 GHSIAADELLEEMYIGDLKPGTEERLKELKKPRSFDNDTPPLPL--LIALIVLP-AIAVI 117
Query: 433 AYL 441
++
Sbjct: 118 VFV 120
>SPCC16A11.10c |oca8||cytochrome b5 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 129
Score = 68.1 bits (159), Expect = 2e-12
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +1
Query: 91 KYTRAEVAARDNNKQNL-IIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHS 267
K E + N + +L I++ + VYD++ FL+ HPGG EVLVD AG DAS F +VGHS
Sbjct: 4 KTITVEEVLKHNTRDDLYIVVKDKVYDISKFLDAHPGGEEVLVDLAGRDASGPFEDVGHS 63
Query: 268 EIAIEWRNTFKVGEIVDEE 324
E A E F +G ++ E
Sbjct: 64 EDAQELLEKFYIGNLLRTE 82
>SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 147
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 97 TRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECF 249
T+ E+A + I I VY+V+A+L HP G + ++D AG DA+ F
Sbjct: 75 TKEELAKHKTKEDCWIAIRGKVYNVSAYLPYHPAGQKRILDYAGRDATVIF 125
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 34.3 bits (75), Expect = 0.024
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 139 LIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFH--EVGHSEIAIEWRNTFKVGEI 312
L++I+ VV+D+ F +HPGG +L G DA+ F+ H+ A +T++V +
Sbjct: 375 LVLINGVVHDMTGF--EHPGGQGLLRSAFGKDATAAFNGGVYDHTNGAHNLLSTYRVAVV 432
Query: 313 VDEEKLEV 336
++EV
Sbjct: 433 RGGMEVEV 440
>SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 145
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 97 TRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASE 243
T E+A + + I VY+V A+L HP G + ++ ++G DA++
Sbjct: 73 TAEELAKHCSPDDCWMAIRGKVYNVTAYLPYHPVGPKKILKHSGVDATK 121
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 211 LVDNAGSDASECFHEVGHSEIAIEWRNTFKVGEI--VDEEKLEVKCKQPS 354
L D S SE F VG + + RNT ++ I VDE KLE+ K PS
Sbjct: 1449 LDDVERSIESEDFQSVGDVNVKVN-RNTREISFIYNVDEHKLEMAIKIPS 1497
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 257 TSWKHSEASEPALSTRTSVPPGWS--SRKAATSYTTLS 150
+S + A+EP+ ST T +PP +S S A+ Y+T S
Sbjct: 303 SSKREEAAAEPSSSTATDIPPPYSTPSVAGASDYSTPS 340
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 27.1 bits (57), Expect = 3.6
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -1
Query: 332 SNFSSSTISPTLNVLRHSMAISLWPTSWKHSEASEPALSTRTSVPP---GWSSRKAATSY 162
S+ SSS S T + S +S S + +S A+S+ TS+P SS + +S+
Sbjct: 111 SSSSSSAASSTTSTTSSSSLVS----STTLTSSSPSAVSSTTSIPSISSTISSSVSTSSF 166
Query: 161 TTLSMMIRFCLLLSRAATSAL 99
T+LS +L S TSAL
Sbjct: 167 TSLSSSGFSTVLSSTNTTSAL 187
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -1
Query: 311 ISPTLNVLRHSMAISLWPTSWKHSEASEPALSTRTSVPPGWSSRKAATSYTTLSM 147
+ T + R +S P + HS SE +STRTS P S + T+++ ++
Sbjct: 52 VDSTESTKRSENFVSHIPLTPSHSGQSEKLMSTRTSHSPYISPTMSYTNHSPANL 106
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,322,174
Number of Sequences: 5004
Number of extensions: 41051
Number of successful extensions: 127
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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